CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030917.1-P	Field mustard	extracellular, vacuole	100.0	100.0
CDY69407	Canola	extracellular	56.33	83.27
CDY36619	Canola	endoplasmic reticulum, plasma membrane	80.86	80.86
CDY69208	Canola	mitochondrion	66.31	78.85
CDY30674	Canola	extracellular, vacuole	78.17	77.96
AT1G53990.1	Thale cress	extracellular, plasma membrane	74.93	75.75
CDY24064	Canola	plasma membrane	73.32	72.34
CDY36617	Canola	plasma membrane	66.31	71.1
CDX98432	Canola	extracellular	65.23	64.88
CDX97557	Canola	extracellular	64.96	64.61
CDX98433	Canola	extracellular, vacuole	60.65	60.16
CDX97558	Canola	extracellular	60.11	59.63
CDY71922	Canola	extracellular, plasma membrane	35.31	59.01
Solyc01g109020.1.1	Tomato	extracellular	26.42	51.58
Solyc11g021040.1.1	Tomato	extracellular	28.84	51.2
PGSC0003DMT400016123	Potato	cytosol	11.59	49.43
PGSC0003DMT400080416	Potato	golgi, vacuole	47.98	49.17
CDY25680	Canola	extracellular, plasma membrane	22.1	49.1
Solyc06g065010.2.1	Tomato	nucleus	47.17	48.34
Solyc11g051060.1.1	Tomato	vacuole	46.9	48.33
CDY02491	Canola	plastid	22.1	48.24
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	47.71	48.23
PGSC0003DMT400013272	Potato	extracellular, vacuole	46.9	47.41
Solyc06g064960.2.1	Tomato	extracellular	46.09	46.72
Solyc06g064980.2.1	Tomato	extracellular	47.44	45.95
Solyc06g064990.2.1	Tomato	extracellular	47.71	45.74
PGSC0003DMT400017106	Potato	extracellular	45.55	45.68
Solyc11g051100.1.1	Tomato	cytosol, extracellular	8.63	45.07
PGSC0003DMT400074599	Potato	cytosol	35.04	39.27
CDX75755	Canola	plastid	45.28	39.16
Solyc06g064970.2.1	Tomato	extracellular, vacuole	36.66	37.99
Solyc04g028470.1.1	Tomato	cytosol	32.61	37.81
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	12.4	35.11
CDY54192	Canola	extracellular	11.05	30.6
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	29.38	30.19
Solyc11g051120.1.1	Tomato	cytosol	11.59	29.66
CDY54197	Canola	extracellular, vacuole	31.54	29.62
CDY61480	Canola	extracellular, vacuole	31.0	29.19
CDY33240	Canola	vacuole	27.76	28.69
CDY30680	Canola	mitochondrion	30.19	27.72
CDY39106	Canola	vacuole	26.68	27.58
CDY36628	Canola	cytosol	28.3	27.42
CDY08214	Canola	cytosol	20.22	27.17
CDY54591	Canola	extracellular	28.03	26.87
CDY30675	Canola	endoplasmic reticulum, vacuole	27.49	26.49
CDY51410	Canola	mitochondrion, plastid	9.97	26.43
CDX97555	Canola	extracellular	27.49	26.42
CDY51412	Canola	cytosol	27.22	26.37
CDY08211	Canola	endoplasmic reticulum, vacuole	27.22	26.23
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	26.68	25.78
CDY36623	Canola	endoplasmic reticulum	26.42	25.59
CDX97556	Canola	extracellular	26.68	25.52
CDY54588	Canola	extracellular	26.42	25.39
CDX98428	Canola	extracellular, plasma membrane, vacuole	26.42	25.26
CDY54196	Canola	extracellular	26.42	25.19
CDY36625	Canola	extracellular	8.89	24.26
CDY54194	Canola	cytosol	18.06	23.93
CDY30676	Canola	cytosol	15.9	23.23
CDY54198	Canola	cytosol	8.09	22.56

Protein Annotations

EnsemblPlants:CDY02490	EnsemblPlantsGene:GSBRNA2T00114129001	Gene3D:3.40.50.1110	GO:A0A078EK83	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	PFAM:PF00657	ProteinID:CDY02490	ProteinID:CDY02490.1	SignalP:SignalP-noTM
SUPFAM:SSF52266	UniParc:UPI00000A6BE7	MapMan:35.1	:	:	:

Description

BnaA08g00970D

Coordinates

chrLK031935:-:413262..415165

Molecular Weight (calculated)

41174.1 Da

IEP (calculated)

8.257

GRAVY (calculated)

-0.136

Length

371 amino acids

Sequence
(BLAST)

001: MKSSRLFSTI LFLYTIILSI SSINCKENNN NLVTNQAALF VFGDSLFDVG NNNYINTTTR SNFFPYGQTF FKVPTGRVSD GRLITDFIAE KAWLPLIPPN
101: LQPGNSNSQL TYGVNFASAG AGALVETFPG MVIDLGTQLN SFRNVERSLR SALGDAEAKK IFSRAVYMFS IGSNDLFFPL VANSSLFQSN TKERFVDFVI
201: GNTTSVLEEV YKMGGRKFGF LNMGAYECAP PSLLLDPTNI GSCSKPVAEL INLHNKKFPD ALNRLQRELS GFRYALHDYH TSLLDRINNP SKYGFKVGQM
301: GCCGSGPFRG INTCGGRMGQ SYELCENVND YLFFDSSHLT EKAHQQIAEL VWSGPPNVTR PYNLKALFEL N

Best Arabidopsis Sequence Match ( AT1G53990.1 )
(BLAST)

001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT

Arabidopsis Description

GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.