CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97558	Canola	extracellular	96.52	96.52
CDY24064	Canola	plasma membrane	62.57	62.23
CDY36619	Canola	endoplasmic reticulum, plasma membrane	61.5	61.99
CDY02490	Canola	extracellular, vacuole	60.16	60.65
CDY36617	Canola	plasma membrane	55.35	59.83
CDY30674	Canola	extracellular, vacuole	59.36	59.68
CDY69407	Canola	extracellular	37.17	55.38
CDY69208	Canola	mitochondrion	45.45	54.49
CDX98432	Canola	extracellular	53.21	53.35
CDX97557	Canola	extracellular	52.94	53.08
Solyc01g109020.1.1	Tomato	extracellular	25.4	50.0
Solyc11g021040.1.1	Tomato	extracellular	27.54	49.28
PGSC0003DMT400080416	Potato	golgi, vacuole	47.59	49.17
Solyc06g065010.2.1	Tomato	nucleus	46.52	48.07
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	47.06	47.96
Solyc11g051060.1.1	Tomato	vacuole	45.99	47.78
CDY25680	Canola	extracellular, plasma membrane	21.12	47.31
CDY02491	Canola	plastid	21.12	46.47
Solyc06g064960.2.1	Tomato	extracellular	44.65	45.63
CDY71922	Canola	extracellular, plasma membrane	27.01	45.5
PGSC0003DMT400013272	Potato	extracellular, vacuole	44.38	45.23
Solyc06g064980.2.1	Tomato	extracellular	44.38	43.34
Solyc06g064990.2.1	Tomato	extracellular	44.65	43.15
PGSC0003DMT400016123	Potato	cytosol	9.89	42.53
PGSC0003DMT400074599	Potato	cytosol	37.43	42.3
Solyc11g051100.1.1	Tomato	cytosol, extracellular	8.02	42.25
PGSC0003DMT400017106	Potato	extracellular	41.71	42.16
Solyc04g028470.1.1	Tomato	cytosol	34.49	40.31
Solyc06g064970.2.1	Tomato	extracellular, vacuole	36.1	37.71
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	13.1	37.4
CDX75755	Canola	plastid	39.84	34.73
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	28.07	29.09
CDY61480	Canola	extracellular, vacuole	30.48	28.93
CDY33240	Canola	vacuole	27.54	28.69
CDY54197	Canola	extracellular, vacuole	30.21	28.61
CDY54192	Canola	extracellular	10.16	28.36
CDX97555	Canola	extracellular	29.14	28.24
CDY39106	Canola	vacuole	27.01	28.13
CDY30675	Canola	endoplasmic reticulum, vacuole	28.61	27.79
CDY08211	Canola	endoplasmic reticulum, vacuole	28.61	27.79
CDY36628	Canola	cytosol	28.34	27.68
CDX98428	Canola	extracellular, plasma membrane, vacuole	28.34	27.32
CDX97556	Canola	extracellular	28.07	27.06
CDY51412	Canola	cytosol	27.54	26.89
CDY54588	Canola	extracellular	27.27	26.42
CDY30680	Canola	mitochondrion	28.34	26.24
CDY54196	Canola	extracellular	27.27	26.22
CDY36623	Canola	endoplasmic reticulum	26.74	26.11
CDY54591	Canola	extracellular	27.01	26.1
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	26.2	25.52
Solyc11g051120.1.1	Tomato	cytosol	9.89	25.52
CDY08214	Canola	cytosol	17.91	24.28
CDY30676	Canola	cytosol	16.04	23.62
CDY51410	Canola	mitochondrion, plastid	8.82	23.57
CDY54194	Canola	cytosol	17.11	22.86
CDY36625	Canola	extracellular	8.02	22.06
CDY54198	Canola	cytosol	6.68	18.8

Protein Annotations

EnsemblPlants:CDX98433	EnsemblPlantsGene:GSBRNA2T00106036001	Gene3D:3.40.50.1110	GO:A0A078EGE9	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	PFAM:PF00657	ProteinID:CDX98433	ProteinID:CDX98433.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52266	TMHMM:TMhelix	UniParc:UPI0004EE9762	MapMan:35.1	:

Description

BnaC05g39420D

Coordinates

chrLK031905:-:63577..65438

Molecular Weight (calculated)

41667.7 Da

IEP (calculated)

7.956

GRAVY (calculated)

-0.221

Length

374 amino acids

Sequence
(BLAST)

001: MANNVRLCSI LLLFSTIISS INLISCEKSL ITNQSALFVF GDSVFDVGNN NYINTRRTAQ ANVWPYGQTT FKFPTGRNSD GRLIPDFIAE YAWLPLIPPY
101: LQPGNGVNQF TYGVNFASAG AGALVETYQP QNVIPLGSQL NNFKNVEKML KDKLGDAETK RIISRAVYII QIGPNDYFYP FSINASHFES NSKDKFVDNV
201: IGNTTTVIEG IYKLGGRKFG LMNMGRLDCV PGLLTMDPNR IGSCFEPITE LIKLHNLRIP NVLRDLQRRL PGFKYSLFDS YTAGTEAMEN PTKYGFKEVK
301: KACCGSGPFR GSSTCGYRAG TSRDFELCEN VSDYMFFDGS HTSEKANQQT AELMWDGPSD LVGPYTLKTL FQNL

Best Arabidopsis Sequence Match ( AT1G53940.2 )
(BLAST)

001: MENSRSTLII FFAYTTIILI GSINCRDNNN NNLVTNQSAL FVFGDSVFDA GNNNYIDTLP SFRSNYWPYG QTTFKFPTGR VSDGRTIPDF IAEYAWLPLI
101: PAYLQPSNGK NQFPYGVSFA SAGAGALVGT FPGMVINLKS QLNNFKKVEK LLRSTLGEAQ GKMVISRAVY LFHIGVNDYQ YPFSTNSSIF QSSPQEIYVD
201: FVVGNTTAVI KEVYKIGGRK FGFLNMGAYD CAPASLIIDQ TKIGTCFKPV TELINLHNEK LESGLRRLER ELSGFKYALH DYHTSLSVRM NNPSKYGFKE
301: GKMACCGTGP LRGINTCGGR MGVSQSYELC EKVTDYLFFD HFHLTEKAHQ QIAELIWSGP TNVTKPYNLQ ALFELN

Arabidopsis Description

GLIP2GDSL esterase/lipase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.