Factsheet for Bra014374.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Bra024839.1-P	AT2G01950.1	19000166
AT1G54010.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08211	Canola	endoplasmic reticulum, vacuole	100.0	100.0
Bra030915.1-P	Field mustard	extracellular	85.19	84.97
AT1G54010.1	Thale cress	extracellular	83.38	83.16
Bra014372.1-P	Field mustard	extracellular	82.86	83.07
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	81.82	80.56
Bra027359.1-P	Field mustard	extracellular	65.45	67.02
Bra027358.1-P	Field mustard	extracellular	67.27	66.75
Bra030912.1-P	Field mustard	extracellular	75.32	65.17
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	64.42	64.75
Bra037957.1-P	Field mustard	extracellular	62.86	63.19
Bra030913.1-P	Field mustard	cytosol	41.56	57.14
Bra021542.1-P	Field mustard	vacuole	42.6	45.68
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	38.44	37.56
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	37.92	37.53
Bra030911.1-P	Field mustard	extracellular, vacuole	37.92	36.96
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	30.13	31.69
KRG97291	Soybean	extracellular	8.57	31.43
Bra027357.1-P	Field mustard	extracellular	29.09	30.03
KRH13794	Soybean	nucleus	28.31	29.54
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	27.79	29.16
Bra027356.1-P	Field mustard	extracellular	28.31	29.14
KRH13793	Soybean	nucleus	27.79	29.0
KRH47690	Soybean	extracellular, vacuole	27.53	28.96
KRH07083	Soybean	extracellular	20.52	28.73
Solyc11g051060.1.1	Tomato	vacuole	26.75	28.61
KRH69020	Soybean	extracellular	25.97	28.57
VIT_09s0002g00570.t01	Wine grape	extracellular	27.27	28.3
VIT_09s0002g00550.t01	Wine grape	extracellular	26.75	28.3
Bra007962.1-P	Field mustard	extracellular, vacuole	25.45	27.68
KRG94370	Soybean	extracellular	26.23	27.67
Bra039701.1-P	Field mustard	extracellular, plasma membrane	22.86	27.41
Bra030917.1-P	Field mustard	extracellular, vacuole	26.23	27.22
PGSC0003DMT400074599	Potato	cytosol	23.38	27.19
Bra014375.1-P	Field mustard	extracellular, vacuole	26.23	27.15
Solyc06g065010.2.1	Tomato	nucleus	25.45	27.07
Bra030916.1-P	Field mustard	plastid	25.45	27.0
Solyc04g028470.1.1	Tomato	cytosol	22.08	26.56
Solyc06g064960.2.1	Tomato	extracellular	25.19	26.5
KRG97292	Soybean	extracellular	24.94	26.23
PGSC0003DMT400013272	Potato	extracellular, vacuole	24.94	26.16
PGSC0003DMT400017106	Potato	extracellular	24.94	25.95
Solyc06g064980.2.1	Tomato	extracellular	25.71	25.85
KRH06260	Soybean	cytosol, peroxisome	17.92	25.37
PGSC0003DMT400016123	Potato	cytosol	5.71	25.29
PGSC0003DMT400080416	Potato	golgi, vacuole	23.64	25.14
Solyc06g064990.2.1	Tomato	extracellular	24.94	24.81
Bra030918.1-P	Field mustard	plastid	19.48	24.12
Solyc11g051100.1.1	Tomato	cytosol, extracellular	4.42	23.94
Solyc01g109020.1.1	Tomato	extracellular	11.43	23.16
Solyc06g064970.2.1	Tomato	extracellular, vacuole	21.04	22.63
Solyc11g021040.1.1	Tomato	extracellular	11.95	22.01
Solyc11g051120.1.1	Tomato	cytosol	8.05	21.38

Protein Annotations

EnsemblPlants:Bra014374.1	EnsemblPlants:Bra014374.1-P	EnsemblPlantsGene:Bra014374	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF485	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
TMHMM:TMhelix	UniParc:UPI00025459D2	UniProt:M4DD07	MapMan:35.1	:	:

Description

AT1G54010 (E=5e-182) | myrosinase-associated protein, putative

Coordinates

chrA08:-:1308735..1312647

Molecular Weight (calculated)

42612.7 Da

IEP (calculated)

7.496

GRAVY (calculated)

-0.208

Length

385 amino acids

Sequence
(BLAST)

001: MASNCNLVSV LGLLLVLTLM HNPVTVAGQR NSGAALFTFG DSNFDAGNKQ TLTKTNVAQS FWPYGKSRDD PNGKFSDGFI APDFLAKFMG IPIEIPPALV
101: PNVNVSRGAS FAVADATLLG APVESLTLSQ QVRKFNQMKA NWNDDFIKKS AFLIYIGAND YLNFSKNNPN ADASAQQAFV TSVTNKLKND ISLLYSSGAS
201: KFVIQTLAPL GCLPIVRQEY NTGMEKCHEP LNDLAKQHNE KIGPMLNEMA RTTPGFQFTV FDFYDAIIRR TQKPSSYRFF MTNSSCCGIG THDAYGCGLP
301: NVHVRLCEYQ RSYLFFDGRH NTEKAQEMFA HLLIGADKNV IQPMNVRELV VYPVDEPMTE VWVPTTSATV QARESRSSSH GYESY

Best Arabidopsis Sequence Match ( AT1G54010.1 )
(BLAST)

001: MMAKNCNLVS VLCVFLVLTL FNKPITVAGQ NIPAVGLFTF GDSNFDAGNK QTLTKTLLPQ TFWPYGKSRD DPNGKFSDGL IAPDFLAKFM RIPIVIPPAL
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY

Arabidopsis Description

GLL23Inactive GDSL esterase/lipase-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4H8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.