Factsheet for VIT_14s0066g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 1
plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94031	Soybean	cytosol, golgi, plasma membrane	77.72	82.95
KRG93199	Soybean	cytosol, golgi, plasma membrane	74.09	79.27
Solyc12g035470.1.1	Tomato	cytosol	73.85	78.61
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	73.61	78.35
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	73.61	78.35
PGSC0003DMT400040682	Potato	cytosol	73.12	77.84
AT5G14480.1	Thale cress	cytosol	72.64	77.52
CDX70567	Canola	cytosol	71.91	76.74
Bra006256.1-P	Field mustard	cytosol	71.43	76.03
CDX78579	Canola	cytosol, golgi, plasma membrane	71.43	76.03
CDY09858	Canola	cytosol	70.7	75.45
AT3G27540.1	Thale cress	cytosol, golgi, plasma membrane	71.19	75.38
Bra039107.1-P	Field mustard	cytosol	54.24	75.17
CDX91060	Canola	cytosol, golgi, plasma membrane	70.46	75.0
CDX69577	Canola	cytosol	70.22	74.94
Bra008753.1-P	Field mustard	cytosol	69.73	74.42
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	69.73	74.23
CDY68430	Canola	cytosol, golgi, peroxisome	69.73	74.23
CDX83706	Canola	cytosol, golgi, plasma membrane	69.49	73.78
AT3G01620.1	Thale cress	cytosol, golgi, plasma membrane	69.01	73.45
Bra025284.1-P	Field mustard	cytosol	68.77	73.01
CDY13721	Canola	cytosol	68.52	72.75
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	65.86	70.1
HORVU2Hr1G082670.1	Barley	cytosol	19.85	70.09
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	65.86	69.92
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	65.62	69.85
CDY49064	Canola	golgi, plasma membrane, plastid	64.89	69.79
GSMUA_Achr11P...	Banana	cytosol	65.13	69.51
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	64.89	69.07
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	65.13	68.97
CDY37511	Canola	golgi	63.68	68.85
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	64.41	68.38
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	64.41	68.21
Os02t0595100-01	Rice	golgi	61.02	68.11
KXG30544	Sorghum	cytosol, golgi, plasma membrane	63.92	68.04
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	64.16	67.95
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	64.16	67.95
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	63.44	67.53
Zm00001d050961_P001	Maize	plasma membrane	63.2	67.27
EES12371	Sorghum	cytosol, golgi, plasma membrane	62.95	67.01
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	62.95	66.5
Zm00001d017085_P002	Maize	golgi	62.23	66.24
Zm00001d003292_P001	Maize	plasma membrane	61.99	65.98
TraesCS2D01G336600.1	Wheat	cytosol	61.5	65.46
TraesCS2B01G355800.1	Wheat	cytosol	61.26	65.21
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	61.26	65.21
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	61.74	59.72
VIT_11s0016g05630.t01	Wine grape	mitochondrion	50.36	57.3
VIT_01s0137g00810.t01	Wine grape	cytosol	79.18	49.4

Protein Annotations

KEGG:00510+2.4.1.144	EntrezGene:100259362	wikigene:100259362	MapMan:35.2	ProteinID:CCB58457	ProteinID:CCB58457.1
UniProt:F6HUT9	EMBL:FN596252	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17
EntrezGene:LOC100259362	wikigene:LOC100259362	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	TMHMM:TMhelix
UniParc:UPI0002108EAF	ArrayExpress:VIT_14s0066g00350	EnsemblPlantsGene:VIT_14s0066g00350	EnsemblPlants:VIT_14s0066g00350.t01	unigene:Vvi.18700	RefSeq:XP_002272340
RefSeq:XP_002272340.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:+:26869722..26872316

Molecular Weight (calculated)

48309.5 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.147

Length

413 amino acids

Sequence
(BLAST)

001: MADGYYSSKK TDDICEDVCG QQASHGALSM TRLRCILRGL DLKTYILLIV IVPTFFFGVY LHGQKISYFL RPLWESPPKP FIEIPHYYHE DVPMANLCRL
101: HGWGIRESPR RVFDAVLFSN EVDILTIRWK ELYPYVTQVV LLESNSTFTG LPKPLLFSKN RDKFKFIEPR LTYGTIGGRF KKGENPFVEE AYQRVALDQL
201: LKIAGIDDDD LLIMSDVDEI PSSHTINLLR WCDDIPPILH LRLRNYLYSF EFFLDNKSWR ASVHRYQIGK TRYAHYRQTD YVLSDAGWHC SFCFRHISEF
301: IFKMKAYSHC DRVRFSHYMN PKRVQDVICK GSDLFDMLPE EHTFKDIIGK LGPIPHSFSA VHLPAYLLNN AEKYGFLLPG NCKRESDFSL LGILFSFRLF
401: IYKFLQLCCP PYC

Best Arabidopsis Sequence Match ( AT5G14480.1 )
(BLAST)

001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG

Arabidopsis Description

At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.