Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69577 | Canola | cytosol | 98.19 | 98.19 |
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 91.47 | 91.24 |
| CDX70567 | Canola | cytosol | 90.96 | 90.96 |
| AT5G14480.1 | Thale cress | cytosol | 90.96 | 90.96 |
| CDX91060 | Canola | cytosol, golgi, plasma membrane | 89.15 | 88.92 |
| CDY68430 | Canola | cytosol, golgi, peroxisome | 89.15 | 88.92 |
| CDY49064 | Canola | golgi, plasma membrane, plastid | 78.04 | 78.65 |
| CDY37511 | Canola | golgi | 77.0 | 78.01 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 77.0 | 77.0 |
| CDY13721 | Canola | cytosol | 77.26 | 76.86 |
| CDX83706 | Canola | cytosol, golgi, plasma membrane | 76.49 | 76.09 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 75.45 | 75.65 |
| PGSC0003DMT400040682 | Potato | cytosol | 74.16 | 73.97 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 22.22 | 73.5 |
| Solyc12g035470.1.1 | Tomato | cytosol | 73.64 | 73.45 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 72.87 | 72.68 |
| PGSC0003DMT400032896 | Potato | cytosol, golgi, plasma membrane | 72.61 | 72.42 |
| CDY34597 | Canola | cytosol | 72.61 | 71.68 |
| CDY28838 | Canola | golgi | 72.61 | 71.68 |
| CDY56530 | Canola | golgi | 72.09 | 71.17 |
| CDY21077 | Canola | cytosol | 72.09 | 71.17 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 75.45 | 70.7 |
| CDY19406 | Canola | cytosol | 71.58 | 70.66 |
| CDX98021 | Canola | cytosol | 71.06 | 69.97 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 69.51 | 69.33 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 68.99 | 68.81 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 68.22 | 67.87 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 67.96 | 67.61 |
| Os02t0595100-01 | Rice | golgi | 64.08 | 67.03 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 67.44 | 66.92 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 67.18 | 66.67 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 66.67 | 66.49 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 66.41 | 66.24 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 66.67 | 66.15 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 66.67 | 66.15 |
| GSMUA_Achr11P... | Banana | cytosol | 65.63 | 65.63 |
| Zm00001d003292_P001 | Maize | plasma membrane | 65.63 | 65.46 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 65.37 | 65.21 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 65.12 | 64.95 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 65.12 | 64.95 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 65.37 | 64.71 |
| Zm00001d050961_P001 | Maize | plasma membrane | 64.86 | 64.69 |
| Zm00001d017085_P002 | Maize | golgi | 64.86 | 64.69 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 64.86 | 64.69 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 64.34 | 64.18 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 64.6 | 58.55 |
| CDX81440 | Canola | golgi | 49.35 | 53.06 |
| CDX81441 | Canola | golgi | 49.1 | 52.34 |
| CDY37205 | Canola | golgi | 49.1 | 52.34 |
Protein Annotations
| KEGG:00500+2.4.1.14 | KEGG:00510+2.4.1.144 | MapMan:35.2 | GO:A0A078FCT0 | UniProt:A0A078FCT0 | EnsemblPlants:CDY09858 |
| ProteinID:CDY09858 | ProteinID:CDY09858.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00031601001 |
| InterPro:Glyco_trans_17 | PFAM:PF04724 | PANTHER:PTHR12224 | PANTHER:PTHR12224:SF1 | MetaCyc:PWY-7238 | MetaCyc:PWY-7347 |
| MetaCyc:PWY-7426 | TMHMM:TMhelix | UniPathway:UPA00378 | UniParc:UPI0004EF4530 | : | : |
Description
BnaC09g43030DBnaC09g43030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCT0]
Coordinates
chrLK031999:+:581645..583443
Molecular Weight (calculated)
45296.2 Da
IEP (calculated)
7.975
GRAVY (calculated)
-0.321
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGYYSSKK TDDICDDVCG QDGSRAGKAF SRVRCILRGL DFKTYIFFFT LVPLFVFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHP NASMETLCTL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFAAN RGEFEFVEPR LTYGNIGGRF KRGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTIDLLR WCDGYPPVLH LQLKNYLYSF EYFIDSKSWR ASVHRYKRGK TRYAHFRQGD TLLADAGWHC SFCFRRISEF
301: VFKMKAYSHT DRVRFSHYLN PERIQDVICR GTDLFDMFPE EYTFREIIAK LGPIPRSYSA VHLPGHLIEK AESYKYLLPG NCLRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFAAN RGEFEFVEPR LTYGNIGGRF KRGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTIDLLR WCDGYPPVLH LQLKNYLYSF EYFIDSKSWR ASVHRYKRGK TRYAHFRQGD TLLADAGWHC SFCFRRISEF
301: VFKMKAYSHT DRVRFSHYLN PERIQDVICR GTDLFDMFPE EYTFREIIAK LGPIPRSYSA VHLPGHLIEK AESYKYLLPG NCLRESG
001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
Arabidopsis Description
At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.