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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016746.1-P Field mustard cytosol 99.74 99.74
CDY34597 Canola cytosol 99.23 99.23
AT1G12990.1 Thale cress cytosol 95.66 95.66
CDY19406 Canola cytosol 94.13 94.13
CDX98021 Canola cytosol 93.11 92.88
CDY56530 Canola golgi 83.16 83.16
CDY28838 Canola golgi 82.65 82.65
KRH59271 Soybean cytosol 78.83 79.03
KRH43122 Soybean cytosol 78.32 78.52
KRH31342 Soybean cytosol 78.32 78.32
KRG97530 Soybean cytosol 78.06 78.06
PGSC0003DMT400011491 Potato cytosol 77.55 76.57
PGSC0003DMT400047881 Potato cytosol 77.04 76.07
CDX83706 Canola cytosol, golgi, plasma membrane 72.19 72.75
CDY13721 Canola cytosol 71.68 72.24
CDX91060 Canola cytosol, golgi, plasma membrane 71.43 72.16
CDY09858 Canola cytosol 71.17 72.09
CDY68430 Canola cytosol, golgi, peroxisome 71.17 71.91
CDX70567 Canola cytosol 70.92 71.83
CDX69577 Canola cytosol 70.92 71.83
HORVU2Hr1G082670.1 Barley cytosol 21.43 71.79
CDX78579 Canola cytosol, golgi, plasma membrane 70.92 71.65
Solyc05g013580.2.1 Tomato cytosol 61.22 70.18
TraesCS6D01G192500.1 Wheat cytosol, golgi, plasma membrane 67.6 67.95
KXG30544 Sorghum cytosol, golgi, plasma membrane 67.09 67.78
Zm00001d050961_P001 Maize plasma membrane 67.09 67.78
HORVU6Hr1G053550.2 Barley cytosol, golgi, plasma membrane 67.35 67.69
TraesCS6A01G209000.1 Wheat cytosol, golgi, plasma membrane 67.35 67.69
GSMUA_Achr8P28540_001 Banana cytosol, golgi, plasma membrane 67.09 67.61
TraesCS6B01G238000.1 Wheat cytosol, golgi, plasma membrane 67.09 67.44
GSMUA_Achr6P28040_001 Banana cytosol, golgi, plasma membrane 66.58 67.27
Os04t0477500-02 Rice cytosol, golgi, plasma membrane 66.58 67.27
GSMUA_Achr6P12150_001 Banana cytosol, golgi, plasma membrane 66.33 67.01
EES12371 Sorghum cytosol, golgi, plasma membrane 66.33 67.01
GSMUA_Achr11P... Banana cytosol 66.07 66.93
GSMUA_Achr10P... Banana cytosol, golgi, plasma membrane 66.07 66.75
TraesCS2D01G336600.1 Wheat cytosol 66.07 66.75
GSMUA_Achr9P07530_001 Banana cytosol, golgi, plasma membrane 66.07 66.58
Zm00001d003292_P001 Maize plasma membrane 65.82 66.49
TraesCS2B01G355800.1 Wheat cytosol 65.82 66.49
Zm00001d017085_P002 Maize golgi 65.82 66.49
Os02t0594900-01 Rice cytosol, golgi, plasma membrane 66.07 66.24
TraesCS2A01G326200.1 Wheat cytosol, golgi, plasma membrane 65.56 66.24
Os02t0595100-01 Rice golgi 62.5 66.22
CDY37511 Canola golgi 64.29 65.97
CDY49064 Canola golgi, plasma membrane, plastid 64.54 65.89
HORVU2Hr1G082660.5 Barley golgi, mitochondrion 65.05 59.72
CDX81440 Canola golgi 50.0 54.44
CDX81441 Canola golgi 50.26 54.27
CDY37205 Canola golgi 50.26 54.27
VIT_01s0137g00810.t01 Wine grape cytosol 81.89 48.49
Protein Annotations
KEGG:00500+2.4.1.14KEGG:00510+2.4.1.144MapMan:35.2GO:A0A078G7U0UniProt:A0A078G7U0EnsemblPlants:CDY21077
ProteinID:CDY21077ProteinID:CDY21077.1GO:GO:0003674GO:GO:0003824GO:GO:0003830GO:GO:0005575
GO:GO:0005975GO:GO:0006464GO:GO:0006487GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00015250001
InterPro:Glyco_trans_17PFAM:PF04724PANTHER:PTHR12224PANTHER:PTHR12224:SF4MetaCyc:PWY-7238MetaCyc:PWY-7347
MetaCyc:PWY-7426TMHMM:TMhelixUniPathway:UPA00378UniParc:UPI0004EDFB88::
Description
BnaA08g24480DBnaA08g24480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7U0]
Coordinates
chrLK032115:+:572629..574002
Molecular Weight (calculated)
45870.2 Da
IEP (calculated)
7.889
GRAVY (calculated)
-0.245
Length
392 amino acids
Sequence
(BLAST)
001: MWWMMGEAGG HYCSKKTDSI CGGVCSQETG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYIHGQK ISYFLRPLWE SPPKPFHDIP HYHHENATME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELYPY ITQFVLLESN STFTGLPKPL VFAAHRDEFE FVEPRLTYGS LGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEV PKILHLRLKN YLYSFEFLVD NKSWRASVHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF SHFLNPKRVQ RVICKGADLF DMLPEEYTFK DIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCVRE SE
Best Arabidopsis Sequence Match ( AT1G12990.1 )
(BLAST)
001: MWWMMGEAGG HYCSKKTDDI CGGVCSQEPG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYVHGQK ISYFLRPLWE SPPKPFHDIP HYYHENASME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE
Arabidopsis Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4HP06]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.