CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	100.0	100.0
CDX91060	Canola	cytosol, golgi, plasma membrane	96.39	96.39
CDX78579	Canola	cytosol, golgi, plasma membrane	89.95	89.95
CDX70567	Canola	cytosol	89.69	89.92
CDX69577	Canola	cytosol	88.92	89.15
CDY09858	Canola	cytosol	88.92	89.15
AT5G14480.1	Thale cress	cytosol	87.37	87.6
CDY49064	Canola	golgi, plasma membrane, plastid	77.58	78.39
CDY13721	Canola	cytosol	78.09	77.89
CDY37511	Canola	golgi	76.29	77.49
CDX83706	Canola	cytosol, golgi, plasma membrane	77.58	77.38
KRG94031	Soybean	cytosol, golgi, plasma membrane	75.52	75.71
KRG93199	Soybean	cytosol, golgi, plasma membrane	74.74	75.13
HORVU2Hr1G082670.1	Barley	cytosol	22.42	74.36
PGSC0003DMT400040682	Potato	cytosol	72.16	72.16
Solyc12g035470.1.1	Tomato	cytosol	71.65	71.65
CDY34597	Canola	cytosol	72.16	71.43
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	71.39	71.39
CDY21077	Canola	cytosol	71.91	71.17
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	71.13	71.13
CDY28838	Canola	golgi	71.39	70.66
CDY56530	Canola	golgi	71.39	70.66
CDY19406	Canola	cytosol	71.13	70.41
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	69.85	69.85
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	74.23	69.73
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	69.59	69.41
CDX98021	Canola	cytosol	70.1	69.21
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	68.04	67.87
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	67.78	67.78
Os02t0595100-01	Rice	golgi	64.18	67.3
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	66.75	66.41
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	66.49	66.15
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	66.24	65.9
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	65.98	65.64
GSMUA_Achr11P...	Banana	cytosol	65.46	65.63
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	65.46	65.46
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	65.46	65.46
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	65.72	65.22
Zm00001d050961_P001	Maize	plasma membrane	65.21	65.21
EES12371	Sorghum	cytosol, golgi, plasma membrane	65.21	65.21
KXG30544	Sorghum	cytosol, golgi, plasma membrane	65.21	65.21
Zm00001d017085_P002	Maize	golgi	64.95	64.95
Zm00001d003292_P001	Maize	plasma membrane	64.69	64.69
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	63.92	63.92
TraesCS2D01G336600.1	Wheat	cytosol	63.92	63.92
TraesCS2B01G355800.1	Wheat	cytosol	63.66	63.66
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	63.66	57.85
CDX81440	Canola	golgi	49.48	53.33
CDX81441	Canola	golgi	48.97	52.34
CDY37205	Canola	golgi	48.97	52.34

Protein Annotations

KEGG:00500+2.4.1.14	KEGG:00510+2.4.1.144	MapMan:35.2	GO:A0A078JPQ9	UniProt:A0A078JPQ9	EnsemblPlants:CDY68430
ProteinID:CDY68430	ProteinID:CDY68430.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00074205001
InterPro:Glyco_trans_17	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	MetaCyc:PWY-7238	MetaCyc:PWY-7347
MetaCyc:PWY-7426	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI000254356A	:	:

Description

BnaAnng27230DBnaAnng27230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPQ9]

Coordinates

chrLK037326:+:1518..3094

Molecular Weight (calculated)

45131.2 Da

IEP (calculated)

8.446

GRAVY (calculated)

-0.277

Length

388 amino acids

Sequence
(BLAST)

001: MSDGYSYSSK KTDDICEDVC AQDGSRAAKA LSRVRCLLRG LDFKTYILFF TLVPLLIFGA YLHGQKLTYF LRPLWQSPPK PFHTLPHYHH VNVSMQTLCA
101: LHGWTHRDTP RRVFDAVLFS NEVDMLTIRW KELHPYVTQF VILESNSTFT GLPKPLVFAA NRESFDFVEP RLTYGSVGGR FKRGENPFVE EAYQRIALDQ
201: LIRLAGIQED DLLIMSDVDE IPSAHTINLL RWCDGYPPVL HLQLKNYLYS FEYYVDNKSW RGSVHRYIPG KTRYAHFRQG DVLLADSGWH CSFCFRRISE
301: FVFKMKAYSH NDRVRFSHYL NPKRIQDVIC RGTDLFDMIP EEYTFREIIG KLGPIPRSYS AVHLPSHLIE KAESYKYLLP GNCVRESG

Best Arabidopsis Sequence Match ( AT5G14480.1 )
(BLAST)

001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG

Arabidopsis Description

At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.