Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 97.69 | 97.69 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 97.44 | 97.44 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 96.92 | 96.92 |
| Os02t0595100-01 | Rice | golgi | 87.18 | 91.89 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 91.54 | 91.3 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 90.0 | 90.46 |
| Zm00001d050961_P001 | Maize | plasma membrane | 89.74 | 90.21 |
| Zm00001d017085_P002 | Maize | golgi | 86.92 | 87.37 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 25.13 | 83.76 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 78.72 | 78.92 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 77.69 | 78.09 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 77.44 | 77.84 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 77.44 | 77.64 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 76.41 | 76.8 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 80.26 | 73.3 |
| KRG97530 | Soybean | cytosol | 71.03 | 70.66 |
| KRH31342 | Soybean | cytosol | 70.0 | 69.64 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 68.97 | 69.51 |
| Bra004065.1-P | Field mustard | cytosol, endoplasmic reticulum, mitochondrion | 59.74 | 69.14 |
| Bra039107.1-P | Field mustard | cytosol | 52.82 | 69.13 |
| PGSC0003DMT400047881 | Potato | cytosol | 70.0 | 68.77 |
| AT5G14480.1 | Thale cress | cytosol | 68.21 | 68.73 |
| AT1G12990.1 | Thale cress | cytosol | 68.46 | 68.11 |
| PGSC0003DMT400032896 | Potato | cytosol, golgi, plasma membrane | 67.69 | 68.04 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 67.44 | 67.78 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 67.44 | 67.78 |
| KRH59271 | Soybean | cytosol | 67.69 | 67.52 |
| CDY13721 | Canola | cytosol | 67.18 | 67.35 |
| Bra025284.1-P | Field mustard | cytosol | 67.18 | 67.35 |
| CDY34597 | Canola | cytosol | 67.69 | 67.35 |
| CDY21077 | Canola | cytosol | 67.69 | 67.35 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 67.18 | 67.18 |
| Bra016746.1-P | Field mustard | cytosol | 67.44 | 67.09 |
| Bra019802.1-P | Field mustard | cytosol | 66.92 | 66.92 |
| CDX83706 | Canola | cytosol, golgi, plasma membrane | 66.67 | 66.84 |
| CDY19406 | Canola | cytosol | 67.18 | 66.84 |
| CDX69577 | Canola | cytosol | 66.15 | 66.67 |
| CDY09858 | Canola | cytosol | 66.15 | 66.67 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 65.9 | 66.58 |
| KRH43122 | Soybean | cytosol | 66.67 | 66.5 |
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 66.15 | 66.49 |
| Bra006256.1-P | Field mustard | cytosol | 66.15 | 66.49 |
| CDX98021 | Canola | cytosol | 66.92 | 66.41 |
| Bra008753.1-P | Field mustard | cytosol | 65.9 | 66.41 |
| CDX70567 | Canola | cytosol | 65.9 | 66.41 |
| PGSC0003DMT400040682 | Potato | cytosol | 65.9 | 66.24 |
| CDX91060 | Canola | cytosol, golgi, plasma membrane | 65.9 | 66.24 |
| Solyc12g035470.1.1 | Tomato | cytosol | 65.9 | 66.24 |
| PGSC0003DMT400011491 | Potato | cytosol | 67.18 | 66.0 |
| CDY68430 | Canola | cytosol, golgi, peroxisome | 65.64 | 65.98 |
| Bra023467.1-P | Field mustard | cytosol, golgi, peroxisome | 65.64 | 65.98 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 68.97 | 65.13 |
| CDY28838 | Canola | golgi | 65.13 | 64.8 |
| CDY56530 | Canola | golgi | 65.13 | 64.8 |
| CDY37511 | Canola | golgi | 63.33 | 64.66 |
| AT1G67880.1 | Thale cress | golgi | 64.62 | 64.62 |
| CDY49064 | Canola | golgi, plasma membrane, plastid | 63.59 | 64.58 |
| Solyc05g013580.2.1 | Tomato | cytosol | 54.87 | 62.57 |
| AT3G26445.1 | Thale cress | extracellular, golgi | 16.67 | 55.08 |
| HORVU5Hr1G011270.1 | Barley | golgi, plastid | 47.18 | 49.46 |
| HORVU6Hr1G013610.2 | Barley | golgi, mitochondrion | 47.69 | 48.44 |
| VIT_01s0137g00810.t01 | Wine grape | cytosol | 69.23 | 40.79 |
Protein Annotations
| KEGG:00510+2.4.1.144 | MapMan:35.2 | EMBL:AK357324 | EMBL:AK366038 | UniProt:F2D0B7 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:Glyco_trans_17 | EnsemblPlantsGene:HORVU6Hr1G053550 | EnsemblPlants:HORVU6Hr1G053550.2 | PFAM:PF04724 |
| PANTHER:PTHR12224 | PANTHER:PTHR12224:SF5 | TMHMM:TMhelix | UniParc:UPI0002004FC0 | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D0B7]
Coordinates
chrchr6H:+:334493432..334496468
Molecular Weight (calculated)
45581.9 Da
IEP (calculated)
7.196
GRAVY (calculated)
-0.211
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAGYYTNC KKTDGICEGI CDGEHGSKSV LSMSRLKCAL RGFDLKALLF LLIGVPIIIF VIYVHGQKVT YFLRPIWEKP PKPFTVLPHY YHENVSMANL
101: CKLHGWKVRE APRRVFDAVL FSNELDILDI RWHELSPYVS EFVLLESNST FTGLEKKLHF KENRQKFEFA ESRLTYGMIG GRFVKGENPF VEESYQRVAL
201: DQLLKIAGIT DDDLLIMSDV DEIPSGHTIN LLRWCDDTPE ILHLQLRNYL YSFEFFLDDK SWRASIHRYR AGKTRYAHYR QTDELLADSG WHCSFCFRYI
301: NDFVFKMKAY SHVDRIRFSY FLNPKRIQHV ICQGADLFDM LPEEYTFQEI IAKLGPIPST YSAVHLPAYL LEKFDQYRYL LPGNCMRESG
101: CKLHGWKVRE APRRVFDAVL FSNELDILDI RWHELSPYVS EFVLLESNST FTGLEKKLHF KENRQKFEFA ESRLTYGMIG GRFVKGENPF VEESYQRVAL
201: DQLLKIAGIT DDDLLIMSDV DEIPSGHTIN LLRWCDDTPE ILHLQLRNYL YSFEFFLDDK SWRASIHRYR AGKTRYAHYR QTDELLADSG WHCSFCFRYI
301: NDFVFKMKAY SHVDRIRFSY FLNPKRIQHV ICQGADLFDM LPEEYTFQEI IAKLGPIPST YSAVHLPAYL LEKFDQYRYL LPGNCMRESG
001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
Arabidopsis Description
At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.