Factsheet for HORVU6Hr1G013610.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
golgi 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G103200.1	Wheat	golgi	87.5	88.42
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	85.94	86.61
TraesCSU01G026400.1	Wheat	golgi	83.85	85.19
TraesCS6A01G077400.1	Wheat	mitochondrion	76.56	80.11
HORVU5Hr1G011270.1	Barley	golgi, plastid	68.23	70.43
GSMUA_Achr7P01000_001	Banana	golgi	61.98	65.93
GSMUA_Achr4P31720_001	Banana	mitochondrion	58.85	62.26
HORVU2Hr1G082670.1	Barley	cytosol	18.75	61.54
KRH03667	Soybean	golgi, mitochondrion	57.55	59.73
CDX81440	Canola	golgi	55.47	59.17
AT2G13290.1	Thale cress	golgi	55.21	58.73
Bra037205.1-P	Field mustard	golgi	55.47	58.68
CDX81441	Canola	golgi	55.47	58.68
CDY37205	Canola	golgi	55.47	58.68
KRH20138	Soybean	golgi, mitochondrion	56.51	58.65
VIT_11s0016g05630.t01	Wine grape	mitochondrion	54.69	57.85
Solyc07g008030.1.1	Tomato	mitochondrion	54.43	56.03
PGSC0003DMT400079376	Potato	golgi, mitochondrion	53.91	55.5
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	48.44	47.69
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	47.66	42.86

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	EnsemblPlantsGene:HORVU6Hr1G013610
EnsemblPlants:HORVU6Hr1G013610.2	UniProt:M0ZCX4	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	TMHMM:TMhelix
UniParc:UPI000295E999	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:28152388..28154676

Molecular Weight (calculated)

43887.0 Da

IEP (calculated)

9.784

GRAVY (calculated)

-0.154

Length

384 amino acids

Sequence
(BLAST)

001: MMAGSSEYRP FNLAARVGKR RLIPFNFKLK SAVPAIALFL TAVAILAGIT QHHRSITYFL RPLWDTPPKP FTVIPHYYAP NTSMAELCEL HGWRARASPR
101: RVFDAVLFNN ELDILEIRYR ELLPYVHKLV ILEANATFTG IPKPLSFSEN LERFAFARSK IVYDRLPVAT ATAGSQGSRR REEPFDVEAR HRRALNALLR
201: RSGIAAGDVV IMADADEIPS PETVQLLRWC DGVPAVMHLQ LENYVYSFEF PVDRGSWRAT AHIFSERTAY QHSRQSDVIL ADAGWHCSFC FREIAEFAFK
301: MKAYSHADRV RRESFLDPAR IQRVVCGGED LFDMLPEEYT FRDLFKKMGP IPRSASAVHL PSYLIKNAHR FRFLLPGGCL RRPA

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.