Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037205.1-P | Field mustard | golgi | 85.6 | 85.12 |
| CDX81441 | Canola | golgi | 85.6 | 85.12 |
| CDY37205 | Canola | golgi | 85.6 | 85.12 |
| CDX81440 | Canola | golgi | 84.49 | 84.72 |
| VIT_11s0016g05630.t01 | Wine grape | mitochondrion | 69.25 | 68.87 |
| PGSC0003DMT400079376 | Potato | golgi, mitochondrion | 68.42 | 66.22 |
| Solyc07g008030.1.1 | Tomato | mitochondrion | 68.14 | 65.95 |
| KRH20138 | Soybean | golgi, mitochondrion | 66.48 | 64.86 |
| KRH03667 | Soybean | golgi, mitochondrion | 66.48 | 64.86 |
| GSMUA_Achr7P01000_001 | Banana | golgi | 62.88 | 62.88 |
| GSMUA_Achr4P31720_001 | Banana | mitochondrion | 62.88 | 62.53 |
| OQU79586 | Sorghum | mitochondrion | 59.83 | 59.34 |
| Zm00001d041299_P001 | Maize | golgi, mitochondrion | 59.56 | 59.07 |
| Os12t0611900-01 | Rice | golgi, mitochondrion | 58.45 | 57.97 |
| TraesCS5A01G046600.1 | Wheat | golgi, mitochondrion, plastid | 57.62 | 56.83 |
| TraesCS5D01G056900.1 | Wheat | golgi, mitochondrion, plastid | 57.62 | 56.83 |
| HORVU5Hr1G011270.1 | Barley | golgi, plastid | 57.89 | 56.18 |
| TraesCS5B01G051200.1 | Wheat | golgi, mitochondrion | 57.89 | 56.18 |
| TraesCSU01G026800.1 | Wheat | mitochondrion, peroxisome, vacuole | 58.45 | 55.38 |
| TraesCSU01G026400.1 | Wheat | golgi | 57.89 | 55.29 |
| HORVU6Hr1G013610.2 | Barley | golgi, mitochondrion | 58.73 | 55.21 |
| TraesCS6B01G103200.1 | Wheat | golgi | 57.62 | 54.74 |
| AT1G12990.1 | Thale cress | cytosol | 55.96 | 51.53 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 54.85 | 50.77 |
| AT1G67880.1 | Thale cress | golgi | 53.19 | 49.23 |
| TraesCS6A01G077400.1 | Wheat | mitochondrion | 49.86 | 49.05 |
| AT5G14480.1 | Thale cress | cytosol | 52.35 | 48.84 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 52.35 | 48.71 |
| AT3G26445.1 | Thale cress | extracellular, golgi | 10.53 | 32.2 |
Protein Annotations
| KEGG:00510+2.4.1.144 | MapMan:35.2 | EntrezGene:815815 | UniProt:A0A178VNN2 | ProteinID:AAD20428.1 | ProteinID:AEC06223.1 |
| ProteinID:AEC06224.1 | ArrayExpress:AT2G13290 | EnsemblPlantsGene:AT2G13290 | RefSeq:AT2G13290 | TAIR:AT2G13290 | RefSeq:AT2G13290-TAIR-G |
| EnsemblPlants:AT2G13290.1 | TAIR:AT2G13290.1 | EMBL:BT004221 | EMBL:BT005063 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003830 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_17 | InterPro:IPR029044 | EMBL:KJ138916 | RefSeq:NP_178963.1 |
| RefSeq:NP_973449.1 | InterPro:Nucleotide-diphossugar_trans | ProteinID:OAP07338.1 | PFAM:PF04724 | PO:PO:0000013 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0007095 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12224 | PANTHER:PTHR12224:SF1 |
| UniProt:Q9SKF0 | SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000000C2EF | SEG:seg | : |
Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
Coordinates
chr2:+:5511562..5513838
Molecular Weight (calculated)
42313.4 Da
IEP (calculated)
8.687
GRAVY (calculated)
-0.230
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.