Factsheet for GSMUA_Achr4P31720_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P01000_001	Banana	golgi	79.34	79.78
VIT_11s0016g05630.t01	Wine grape	mitochondrion	67.22	67.22
KRH03667	Soybean	golgi, mitochondrion	66.67	65.41
KRH20138	Soybean	golgi, mitochondrion	65.01	63.78
PGSC0003DMT400079376	Potato	golgi, mitochondrion	64.74	63.0
OQU79586	Sorghum	mitochondrion	63.09	62.91
AT2G13290.1	Thale cress	golgi	62.53	62.88
Solyc07g008030.1.1	Tomato	mitochondrion	64.46	62.73
CDX81440	Canola	golgi	61.98	62.5
Os12t0611900-01	Rice	golgi, mitochondrion	61.98	61.81
Bra037205.1-P	Field mustard	golgi	61.71	61.71
CDX81441	Canola	golgi	61.71	61.71
CDY37205	Canola	golgi	61.71	61.71
Zm00001d041299_P001	Maize	golgi, mitochondrion	61.43	61.26
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	61.43	60.93
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	60.61	60.11
TraesCS6B01G103200.1	Wheat	golgi	62.53	59.74
HORVU5Hr1G011270.1	Barley	golgi, plastid	61.16	59.68
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	60.61	59.14
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	62.26	58.85
TraesCSU01G026400.1	Wheat	golgi	61.16	58.73
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	61.43	58.53
TraesCS6A01G077400.1	Wheat	mitochondrion	53.99	53.41
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	53.44	49.87
GSMUA_Achr11P...	Banana	cytosol	53.17	49.87
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	52.62	49.23
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	51.24	47.94
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	50.69	47.42
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	50.14	46.79

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G31720_001	EnsemblPlants:GSMUA_Achr4P31720_001
EnsemblPlants:GSMUA_Achr4T31720_001	InterPro:Glyco_trans_17	UniProt:M0STT4	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1
TMHMM:TMhelix	UniParc:UPI0002950C74	SEG:seg	:	:	:

Description

glycosyl transferase family 17 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G31720_001]

Coordinates

chr4:-:28810355..28812065

Molecular Weight (calculated)

42005.2 Da

IEP (calculated)

8.962

GRAVY (calculated)

-0.119

Length

363 amino acids

Sequence
(BLAST)

001: MARRSPHPPA VKRKLHHSPV LALLILLLPT LLVVIVCHRQ QISYFLRPIW DTPPRPFVRL PHYYAQDLPM DHLCRLHGWS LLPAPRRVFD AILFSNELDI
101: LEIRYRELAP YVHKFVILES NITFTGIAKP LYFVENYGRF ELLSSKIVHG IFSGEADRTP GRDPFQLEFK QRVALNSLLR GSGIAPGDVV IMSDADEIPS
201: TETIKLLQWC GGVPPVIHLE LRHYMYSFEF PVDYSSWRAT AHMFHPGTRY RHSRQTDLIL ADAGWHCSFC FRTMEEFVFK MTAYSHADRV RRSSFLDHSR
301: IQKIICKGED LFDMLPEEYS FQELIKKMGP IPRSASAVHL PSYLLENADK FRFLLPGGCS RSK

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.