Factsheet for TraesCS6A01G077400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G103200.1	Wheat	golgi	84.74	81.84
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	81.2	78.22
TraesCSU01G026400.1	Wheat	golgi	80.38	78.04
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	80.11	76.56
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	61.85	62.02
GSMUA_Achr7P01000_001	Banana	golgi	55.31	56.23
GSMUA_Achr4P31720_001	Banana	mitochondrion	53.41	53.99
KRH03667	Soybean	golgi, mitochondrion	51.5	51.08
KRH20138	Soybean	golgi, mitochondrion	50.68	50.27
CDX81440	Canola	golgi	49.05	50.0
Bra037205.1-P	Field mustard	golgi	49.32	49.86
CDY37205	Canola	golgi	49.32	49.86
CDX81441	Canola	golgi	49.32	49.86
AT2G13290.1	Thale cress	golgi	49.05	49.86
VIT_11s0016g05630.t01	Wine grape	mitochondrion	48.77	49.31
Solyc07g008030.1.1	Tomato	mitochondrion	48.23	47.45
PGSC0003DMT400079376	Potato	golgi, mitochondrion	47.41	46.65
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	42.51	40.0
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	41.69	39.43

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	PFAM:PF04724
PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G077400	EnsemblPlants:TraesCS6A01G077400.1	SEG:seg

Description

No Description!

Coordinates

chr6A:-:47644157..47647372

Molecular Weight (calculated)

41603.8 Da

IEP (calculated)

10.695

GRAVY (calculated)

-0.081

Length

367 amino acids

Sequence
(BLAST)

001: MRVLAASLDV VRSVWRPQHL SGAMARHSRC AALRVEARVV GKRRRLILPA KLKSAIPAIA LVLSAVAIVA VITQHHRNIT YFLRPLWDTP PKPFTVIPHY
101: YAPNTSMAEL CALHGWRARA SPRRVFDAVL FNNELDILEI RYRELLPYVH KLVILEANAT FTGIAKPLSF AENLERFAFA RSKIVYDRLP IATPRPGSRR
201: REEPFDVEAR HRRALNAPLR RSGVAGGDVV IMADADEIPS PETVQLLRWC DGVPAVMHLQ LENYVYSFEF PVDQGSWRAT AHIFSERTAH ADRVRRQSFL
301: DPARIQRVVC AGAELFDMLP EEYTFRDLFK KMGPIPRSAS AMHLPSYLIK NARRFSFLLP GGCLRSG

Best Arabidopsis Sequence Match ( AT1G12990.1 )
(BLAST)

001: MWWMMGEAGG HYCSKKTDDI CGGVCSQEPG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYVHGQK ISYFLRPLWE SPPKPFHDIP HYYHENASME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4HP06]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.