Factsheet for Bra037205.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81441	Canola	golgi	99.45	99.45
CDY37205	Canola	golgi	99.45	99.45
AT2G13290.1	Thale cress	golgi	85.12	85.6
VIT_11s0016g05630.t01	Wine grape	mitochondrion	68.04	68.04
PGSC0003DMT400079376	Potato	golgi, mitochondrion	67.49	65.68
Solyc07g008030.1.1	Tomato	mitochondrion	67.22	65.42
KRH20138	Soybean	golgi, mitochondrion	65.56	64.32
KRH03667	Soybean	golgi, mitochondrion	65.29	64.05
GSMUA_Achr4P31720_001	Banana	mitochondrion	61.71	61.71
GSMUA_Achr7P01000_001	Banana	golgi	60.88	61.22
Zm00001d041299_P001	Maize	golgi, mitochondrion	59.5	59.34
OQU79586	Sorghum	mitochondrion	59.23	59.07
Os12t0611900-01	Rice	golgi, mitochondrion	58.68	58.52
Bra004065.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	53.44	57.57
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	57.58	57.1
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	57.58	57.1
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	57.85	56.45
HORVU5Hr1G011270.1	Barley	golgi, plastid	57.58	56.18
TraesCS6B01G103200.1	Wheat	golgi	58.13	55.53
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	58.68	55.47
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	58.13	55.38
TraesCSU01G026400.1	Wheat	golgi	57.58	55.29
Bra039107.1-P	Field mustard	cytosol	44.35	54.03
Bra019802.1-P	Field mustard	cytosol	55.1	51.28
Bra016746.1-P	Field mustard	cytosol	54.27	50.26
Bra025284.1-P	Field mustard	cytosol	52.89	49.36
TraesCS6A01G077400.1	Wheat	mitochondrion	49.86	49.32
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	51.79	48.45
Bra006256.1-P	Field mustard	cytosol	51.52	48.2
Bra008753.1-P	Field mustard	cytosol	50.96	47.8

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EnsemblPlantsGene:Bra037205	EnsemblPlants:Bra037205.1	EnsemblPlants:Bra037205.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019538	InterPro:Glyco_trans_17	InterPro:IPR029044	UniProt:M4F7Z4	InterPro:Nucleotide-diphossugar_trans	PFAM:PF04724
PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002541C22	SEG:seg

Description

AT2G13290 (E=5e-189) | glycosyl transferase family 17 protein

Coordinates

chrA09:+:3948107..3949198

Molecular Weight (calculated)

42387.3 Da

IEP (calculated)

8.798

GRAVY (calculated)

-0.270

Length

363 amino acids

Sequence
(BLAST)

001: MKIRSLRQPP PKLVLLPTLV IIVSSTCLLG ILTNLQTLSY LLRPLWDKPP PPFRRIPHYY AENVSMAHLC NLHGWTPRTE PRRVFDAIIF SNELDLLELR
101: WQELGPYVSK FVILESNTTF TGIPKPLFFD SNKERFAFAQ GKIVHGVFPG KKRLHHDQQQ EDPFLLEGQQ RVAMNWLLRE ANVSDGDAVI MSDADEIPSP
201: HTVKFLQWCD GIPDVMHLEM RDYMYSFEFP VDYSSWRASV HIYSRKWTHY RHSRQTDLIL SDAGWHCSFC FRRLSEFVFK MKGYSHADRV KRKEFLDYSR
301: IQKHICKGYD LFDMLPEEYS FKDLISKIGP IPPSTSAVHL PAFLIQNAAR FRFLLPGGCL REP

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.