Factsheet for VIT_11s0016g05630.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20138	Soybean	golgi, mitochondrion	78.79	77.3
KRH03667	Soybean	golgi, mitochondrion	78.24	76.76
Solyc07g008030.1.1	Tomato	mitochondrion	74.1	72.12
PGSC0003DMT400079376	Potato	golgi, mitochondrion	74.1	72.12
CDX81440	Canola	golgi	69.15	69.72
AT2G13290.1	Thale cress	golgi	68.87	69.25
CDX81441	Canola	golgi	68.32	68.32
CDY37205	Canola	golgi	68.32	68.32
Bra037205.1-P	Field mustard	golgi	68.04	68.04
GSMUA_Achr4P31720_001	Banana	mitochondrion	67.22	67.22
GSMUA_Achr7P01000_001	Banana	golgi	66.67	67.04
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	59.78	59.29
Zm00001d041299_P001	Maize	golgi, mitochondrion	59.23	59.07
OQU79586	Sorghum	mitochondrion	59.23	59.07
Os12t0611900-01	Rice	golgi, mitochondrion	58.95	58.79
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	59.23	58.74
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	59.5	58.06
HORVU5Hr1G011270.1	Barley	golgi, plastid	59.5	58.06
TraesCSU01G026400.1	Wheat	golgi	58.13	55.82
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	57.85	55.12
TraesCS6B01G103200.1	Wheat	golgi	57.58	55.0
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	57.85	54.69
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	57.3	50.36
TraesCS6A01G077400.1	Wheat	mitochondrion	49.31	48.77
VIT_01s0137g00810.t01	Wine grape	cytosol	59.5	32.63

Protein Annotations

KEGG:00510+2.4.1.144	EntrezGene:100254389	wikigene:100254389	MapMan:35.2	EMBL:AM441711	ProteinID:CAN62998
ProteinID:CAN62998.1	ProteinID:CCB51601	ProteinID:CCB51601.1	UniProt:F6HHA5	EMBL:FN595756	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019538	InterPro:Glyco_trans_17	EntrezGene:LOC100254389	wikigene:LOC100254389	PFAM:PF04724	PANTHER:PTHR12224
PANTHER:PTHR12224:SF1	TIGR:TC66790	TMHMM:TMhelix	UniParc:UPI00015C8F3A	ArrayExpress:VIT_11s0016g05630	EnsemblPlantsGene:VIT_11s0016g05630
EnsemblPlants:VIT_11s0016g05630.t01	unigene:Vvi.17819	RefSeq:XP_002282327	RefSeq:XP_002282327.1	RefSeq:XP_010656456.1	RefSeq:XP_019078359.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:5086950..5092962

Molecular Weight (calculated)

42119.9 Da

IEP (calculated)

9.120

GRAVY (calculated)

-0.179

Length

363 amino acids

Sequence
(BLAST)

001: MATRPTRITT RRAPPKFLFL LLLILVPICV IGIFTHGQKI SYFFRPLWDN PPPPFIRVPH YYAENVSMDH LCRLHGWSLR SEPRRVFDAI IFSNELDMLE
101: VRWRELHPYV SKFVILESNT TFTGIPKPLF FASNRARFAF AEDKIAHGVF SGRTADRGSH KDPFVLESAQ RGAMNGLLHR AGISNGDLLI MSDTDEVPSP
201: HTIKLLQWCD EVPPVLHLEL RHYMYSFEFP VDYSSWRATA HIYGPWTQYR HSRQTNIILS DAGWHCSFCF RYIREFVFKM TAYSHADRVK RSDFLKHSRI
301: QKLICQGDDL FDMLPEEYSF SELIKKMGSI PRSASAVNLP AYLIENAVKY RFLLPGGCIR PSE

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.