Factsheet for TraesCS5B01G051200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	97.85	99.45
HORVU5Hr1G011270.1	Barley	golgi, plastid	98.12	98.12
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	96.51	98.09
OQU79586	Sorghum	mitochondrion	79.03	80.77
Os12t0611900-01	Rice	golgi, mitochondrion	78.23	79.95
Zm00001d041299_P001	Maize	golgi, mitochondrion	77.96	79.67
TraesCS6B01G103200.1	Wheat	golgi	70.97	69.47
GSMUA_Achr7P01000_001	Banana	golgi	60.75	62.6
GSMUA_Achr4P31720_001	Banana	mitochondrion	59.14	60.61
KRH03667	Soybean	golgi, mitochondrion	60.22	60.54
VIT_11s0016g05630.t01	Wine grape	mitochondrion	58.06	59.5
KRH20138	Soybean	golgi, mitochondrion	59.14	59.46
AT2G13290.1	Thale cress	golgi	56.18	57.89
CDY37205	Canola	golgi	56.45	57.85
CDX81441	Canola	golgi	56.45	57.85
Bra037205.1-P	Field mustard	golgi	56.45	57.85
CDX81440	Canola	golgi	55.65	57.5
Solyc07g008030.1.1	Tomato	mitochondrion	53.49	53.35
PGSC0003DMT400079376	Potato	golgi, mitochondrion	53.23	53.08
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	50.54	48.21
TraesCS2B01G355800.1	Wheat	cytosol	47.85	45.88

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	PFAM:PF04724
PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G051200	EnsemblPlants:TraesCS5B01G051200.1	:

Description

No Description!

Coordinates

chr5B:-:55549550..55550668

Molecular Weight (calculated)

43088.2 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.137

Length

372 amino acids

Sequence
(BLAST)

001: MKQDSRMAGN SVNLPHVTRR RSTLAFKFLI PFVLVLSVSV IAVTQYFQSI SYFLRPLWDT PPKPFTRIPH YYAPNMSMHQ LCQLHGWGIL SSPRRVFDAV
101: LFSNELDVLE IRYHELFPYV DRFVILEANA TFTGIPKSLT FFENLNRFAF ASSKIVYDML PIGELDPDSR RMPFLVEAGH RRALNNLLKR SGIAVGDVLI
201: MADADEIPSP ETVQLLKWCD GIPPIMHLEL KNYMYSFEFH VDQNSWRTTA HVFTERTKYQ HSRQTDLMLA DAGWHCSFCF REIKEFAFKM KAYSHADRVK
301: HDIFLNPDRI QRVICNGDNI FDMLPEEYTF SDLFKKMGPI PRSASAVHLP SYLIRNADSY RFLLPGGCLR PG

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.