CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
golgi 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041299_P001	Maize	golgi, mitochondrion	92.86	92.86
Os12t0611900-01	Rice	golgi, mitochondrion	80.77	80.77
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	80.49	80.05
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	80.22	79.78
HORVU5Hr1G011270.1	Barley	golgi, plastid	81.32	79.57
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	80.77	79.03
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	70.33	67.19
TraesCSU01G026400.1	Wheat	golgi	69.23	66.67
GSMUA_Achr7P01000_001	Banana	golgi	63.74	64.27
GSMUA_Achr4P31720_001	Banana	mitochondrion	62.91	63.09
KRH03667	Soybean	golgi, mitochondrion	61.54	60.54
AT2G13290.1	Thale cress	golgi	59.34	59.83
Bra037205.1-P	Field mustard	golgi	59.07	59.23
VIT_11s0016g05630.t01	Wine grape	mitochondrion	59.07	59.23
CDY37205	Canola	golgi	59.07	59.23
CDX81441	Canola	golgi	59.07	59.23
KRH20138	Soybean	golgi, mitochondrion	59.89	58.92
CDX81440	Canola	golgi	58.24	58.89
Solyc07g008030.1.1	Tomato	mitochondrion	56.04	54.69
PGSC0003DMT400079376	Potato	golgi, mitochondrion	55.77	54.42
KXG30544	Sorghum	cytosol, golgi, plasma membrane	50.55	47.42
EES12371	Sorghum	cytosol, golgi, plasma membrane	50.0	46.91

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EntrezGene:8084386	UniProt:C5YRW2	ProteinID:EES16352.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	ProteinID:KXG23973.1	EnsemblPlants:OQU79586	ProteinID:OQU79586
ProteinID:OQU79586.1	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	EnsemblPlantsGene:SORBI_3008G166100	TMHMM:TMhelix
UniParc:UPI0001A880FE	RefSeq:XP_002442514.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:59977899..59981524

Molecular Weight (calculated)

42185.3 Da

IEP (calculated)

8.904

GRAVY (calculated)

-0.132

Length

364 amino acids

Sequence
(BLAST)

001: MARDLPHPPV ARRKILRFKF LIPFVLVLSV SVIAVTQYFQ SISYLLRPLW DTPPKPFTRI PHYYAPNMSM AQLCQLHGWG ILPAPRRVFD AVLFSNELDI
101: LEIRYRELLP YVDRFVLLEA NSTFTGIPKS LSFFENFSRF GFAGSKIVYD MLSIGDLDTG SHRQPFHVEA YHRRSLNMLI RRSGIAVGDI LIMADADEIP
201: TPETVQLLKW CDGIPPVMHL EMKNYMYSFE FPVDDNSWRA TAHMYNERTS YRHSRQSNLI LADAGWHCSF CFREIKEFVF KMKAYSHADR VKQKSFLNPD
301: RIQKIICNGD DLFDMLPEEY TFTDLFKKMG PIPKSASAVH LPSHLIKNAD KFKFLLPGGC LRSE

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.