Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050961_P001 Maize plasma membrane 97.16 97.16
Zm00001d017085_P002 Maize golgi 93.04 93.04
Os02t0595100-01 Rice golgi 86.86 91.08
Os02t0594900-01 Rice cytosol, golgi, plasma membrane 91.24 90.54
HORVU6Hr1G053550.2 Barley cytosol, golgi, plasma membrane 90.46 90.0
TraesCS6A01G209000.1 Wheat cytosol, golgi, plasma membrane 90.21 89.74
TraesCS6D01G192500.1 Wheat cytosol, golgi, plasma membrane 89.95 89.49
TraesCS6B01G238000.1 Wheat cytosol, golgi, plasma membrane 88.92 88.46
EES12371 Sorghum cytosol, golgi, plasma membrane 83.25 83.25
GSMUA_Achr10P... Banana cytosol, golgi, plasma membrane 79.38 79.38
GSMUA_Achr8P28540_001 Banana cytosol, golgi, plasma membrane 78.87 78.66
GSMUA_Achr9P07530_001 Banana cytosol, golgi, plasma membrane 78.61 78.41
GSMUA_Achr6P12150_001 Banana cytosol, golgi, plasma membrane 78.09 78.09
GSMUA_Achr6P28040_001 Banana cytosol, golgi, plasma membrane 77.58 77.58
Bra039107.1-P Field mustard cytosol 52.58 68.46
KRG97530 Soybean cytosol 68.81 68.11
AT1G12990.1 Thale cress cytosol 68.81 68.11
Bra004065.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion 59.02 67.95
KRG94031 Soybean cytosol, golgi, plasma membrane 67.53 67.7
KRH31342 Soybean cytosol 68.3 67.6
CDY21077 Canola cytosol 67.78 67.09
CDY34597 Canola cytosol 67.78 67.09
Bra016746.1-P Field mustard cytosol 67.53 66.84
AT3G01620.1 Thale cress cytosol, golgi, plasma membrane 66.75 66.75
PGSC0003DMT400047881 Potato cytosol 68.3 66.75
AT5G14480.1 Thale cress cytosol 66.49 66.67
PGSC0003DMT400032896 Potato cytosol, golgi, plasma membrane 66.49 66.49
Bra019802.1-P Field mustard cytosol 66.75 66.41
AT3G27540.1 Thale cress cytosol, golgi, plasma membrane 66.75 66.41
Solyc02g093430.2.1 Tomato cytosol, golgi, plasma membrane 66.24 66.24
Bra025284.1-P Field mustard cytosol 66.24 66.07
CDY13721 Canola cytosol 66.24 66.07
CDX83706 Canola cytosol, golgi, plasma membrane 66.24 66.07
CDX98021 Canola cytosol 66.75 65.9
CDY19406 Canola cytosol 66.49 65.82
CDY68430 Canola cytosol, golgi, peroxisome 65.21 65.21
Bra023467.1-P Field mustard cytosol, golgi, peroxisome 65.21 65.21
CDX91060 Canola cytosol, golgi, plasma membrane 65.21 65.21
CDX70567 Canola cytosol 64.95 65.12
KRH59271 Soybean cytosol 65.46 64.96
CDX78579 Canola cytosol, golgi, plasma membrane 64.95 64.95
Bra006256.1-P Field mustard cytosol 64.95 64.95
PGSC0003DMT400011491 Potato cytosol 66.24 64.74
CDX69577 Canola cytosol 64.18 64.34
CDY09858 Canola cytosol 64.18 64.34
KRH43122 Soybean cytosol 64.69 64.19
Bra008753.1-P Field mustard cytosol 63.92 64.08
CDY49064 Canola golgi, plasma membrane, plastid 63.4 64.06
VIT_14s0066g00350.t01 Wine grape cytosol, golgi, plasma membrane 68.04 63.92
PGSC0003DMT400040682 Potato cytosol 63.92 63.92
Solyc12g035470.1.1 Tomato cytosol 63.92 63.92
CDY37511 Canola golgi 62.89 63.87
KRG93199 Soybean cytosol, golgi, plasma membrane 63.4 63.73
CDY56530 Canola golgi 63.92 63.27
CDY28838 Canola golgi 63.92 63.27
AT1G67880.1 Thale cress golgi 63.4 63.08
Solyc05g013580.2.1 Tomato cytosol 54.64 61.99
AT3G26445.1 Thale cress extracellular, golgi 17.01 55.93
OQU79586 Sorghum mitochondrion 47.42 50.55
VIT_01s0137g00810.t01 Wine grape cytosol 67.78 39.73
Protein Annotations
KEGG:00510+2.4.1.144MapMan:35.2UniProt:A0A194YQN8GO:GO:0003674GO:GO:0003824GO:GO:0003830
GO:GO:0005575GO:GO:0005975GO:GO:0006464GO:GO:0006487GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0019538
InterPro:Glyco_trans_17EnsemblPlants:KXG30544ProteinID:KXG30544ProteinID:KXG30544.1PFAM:PF04724PANTHER:PTHR12224
PANTHER:PTHR12224:SF5MetaCyc:PWY-7238MetaCyc:PWY-7347MetaCyc:PWY-7426EnsemblPlantsGene:SORBI_3004G201700TMHMM:TMhelix
UniParc:UPI0001FCD35DSEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:55332231..55337601
Molecular Weight (calculated)
45481.0 Da
IEP (calculated)
7.753
GRAVY (calculated)
-0.220
Length
388 amino acids
Sequence
(BLAST)
001: MEAGYCNRKK TDGICEGVCD SELGSKSVLS MSRLKCALRG FDLRVLLILL IGVPILIFAI YVHGQKVTYF LRPIWEKPPK PFTIRPHYYH ENVSMANLCK
101: LHGWKVRETP RRVFDAVLFS NELDILDIRW HELSPYVSEF VLLESNSTFT GIKKDLHFKE NRQRFDFAES RLTYGMIGGR FVKGENPFVE ESYQRVALDQ
201: LIKIAGIQDD DLLIMSDVDE IPSGHTINLL RWCDDIPEIL HLQLRNYLYS FQFLLDDKSW RASVHRYRAG KTRYAHFRQT DELLADSGWH CSFCFRYIND
301: FIFKMKAYSH VDRIRFKYFL NPKRIQHVIC EGADLFDMLP EEYTFQEIIA KLGPIPSTFS AVHLPAYLLE QNDRYRYLLP GNCIRESG
Best Arabidopsis Sequence Match ( AT3G27540.1 )
(BLAST)
001: MSDGYINSKK TDDICEDVCG QGSKAAKTIS RLKCVLKGFD LRTYLFLFVL MPFGILAIYL HGQKFTYFFR PLWESPPKPF QTIPHYYNEN VTMESLCSLH
101: GWGIRDSPRR VFDAVLFSNE KDLLTVRWNE LYPYVTQFVI LESNSTFTGL PKPLVFKSNK DQFKFVEPRL TYGTIGGRFR KGENPFVEEA YQRVALDQLL
201: RIAGIQEDDL LIMSDVDEIP SAHTINLLRW CDDIPPVLHL QLKNYLYSFE YYVDSKSWRA SIHRYSPGKT RYAHFRQSNV MLADSGWHCS FCFRYISEFI
301: FKMKAYSHSD RVRFSHYLNP RRIQDVICKG TDLFDMLPEE YTFKEIIGKM GPVPRSYSAV HLPSYLLYNA EQYKYLLPGN CIREKQTGFI
Arabidopsis Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT58]
SUBAcon: [cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.