Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004065.1-P | Field mustard | cytosol, endoplasmic reticulum, mitochondrion | 80.51 | 93.18 |
| CDY56530 | Canola | golgi | 93.33 | 92.86 |
| CDY28838 | Canola | golgi | 93.08 | 92.6 |
| AT1G12990.1 | Thale cress | cytosol | 81.79 | 81.38 |
| KRH59271 | Soybean | cytosol | 77.95 | 77.75 |
| KRH43122 | Soybean | cytosol | 77.95 | 77.75 |
| KRG97530 | Soybean | cytosol | 77.69 | 77.3 |
| KRH31342 | Soybean | cytosol | 77.18 | 76.79 |
| PGSC0003DMT400047881 | Potato | cytosol | 76.41 | 75.06 |
| PGSC0003DMT400011491 | Potato | cytosol | 76.15 | 74.81 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 72.05 | 72.05 |
| AT5G14480.1 | Thale cress | cytosol | 70.77 | 71.32 |
| Solyc05g013580.2.1 | Tomato | cytosol | 62.05 | 70.76 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 67.18 | 67.53 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 20.26 | 67.52 |
| AT3G26445.1 | Thale cress | extracellular, golgi | 20.26 | 66.95 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 65.38 | 65.38 |
| GSMUA_Achr11P... | Banana | cytosol | 64.87 | 65.37 |
| Os02t0595100-01 | Rice | golgi | 61.79 | 65.14 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 65.13 | 65.13 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 64.87 | 65.04 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 64.87 | 64.87 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 64.62 | 64.62 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 64.36 | 64.52 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 63.85 | 64.18 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 63.85 | 64.18 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 63.85 | 64.18 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 63.08 | 63.4 |
| Zm00001d050961_P001 | Maize | plasma membrane | 62.82 | 63.14 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 62.82 | 63.14 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 62.82 | 63.14 |
| Zm00001d017085_P002 | Maize | golgi | 62.56 | 62.89 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 62.82 | 62.66 |
| Zm00001d003292_P001 | Maize | plasma membrane | 62.31 | 62.63 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 62.05 | 62.37 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 61.79 | 62.11 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 61.79 | 62.11 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 61.79 | 56.44 |
| AT2G13290.1 | Thale cress | golgi | 49.23 | 53.19 |
| VIT_01s0137g00810.t01 | Wine grape | cytosol | 78.21 | 46.07 |
Protein Annotations
| KEGG:00510+2.4.1.144 | MapMan:35.2 | EntrezGene:843116 | ProteinID:AAG51993.1 | ProteinID:AEE34714.1 | EMBL:AK226493 |
| ArrayExpress:AT1G67880 | EnsemblPlantsGene:AT1G67880 | RefSeq:AT1G67880 | TAIR:AT1G67880 | RefSeq:AT1G67880-TAIR-G | EnsemblPlants:AT1G67880.1 |
| TAIR:AT1G67880.1 | EMBL:AY080715 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 |
| InterPro:Glyco_trans_17 | EMBL:KJ138950 | RefSeq:NP_176955.1 | PFAM:PF04724 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12224 | PANTHER:PTHR12224:SF4 |
| UniProt:Q9C9V4 | TMHMM:TMhelix | UniParc:UPI000004841A | : | : | : |
Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V4]
Coordinates
chr1:-:25453823..25455823
Molecular Weight (calculated)
45881.4 Da
IEP (calculated)
7.912
GRAVY (calculated)
-0.303
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MWWMMGENGG HYCSKKSDDL CGTQESDRGF GISRLCCILR GVDLKSVLFL LVIMPMCVLG VYINALKISY FLRPLWESPP KPFHEIPHYH HENASMESLC
101: KLHGWRTREY PRRVYDAVLF STEVELLTIR WKELYPYVTQ FVLLESNSTF TGLPKPLVFA GHRDEFKFIE PRLTYGSIGG RFKKGEKNPF YEEAYQRIAL
201: DQLLRIAGIT DDDLLIMSDV DEIPSRHTIN LLRWCDDIPQ ILHLRLKNYL YSFEFPVDDK SWRASVHRYQ TGKTRYAHYR QSDVILADSG WHCSFCFRRI
301: SEFVFKMKAY SHYDRVRFAH YLNPKRVQRV ICSGSDLFDM IPEEYTFKDI IGKMGPIPHS YSAVHLPAYL LENAERYKFL LPGNCLRDEE
101: KLHGWRTREY PRRVYDAVLF STEVELLTIR WKELYPYVTQ FVLLESNSTF TGLPKPLVFA GHRDEFKFIE PRLTYGSIGG RFKKGEKNPF YEEAYQRIAL
201: DQLLRIAGIT DDDLLIMSDV DEIPSRHTIN LLRWCDDIPQ ILHLRLKNYL YSFEFPVDDK SWRASVHRYQ TGKTRYAHYR QSDVILADSG WHCSFCFRRI
301: SEFVFKMKAY SHYDRVRFAH YLNPKRVQRV ICSGSDLFDM IPEEYTFKDI IGKMGPIPHS YSAVHLPAYL LENAERYKFL LPGNCLRDEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.