Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 5
- extracellular 5
- vacuole 3
- plasma membrane 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G12990.1 | Thale cress | cytosol | 68.64 | 20.66 |
| AT1G67880.1 | Thale cress | golgi | 66.95 | 20.26 |
| Solyc05g013580.2.1 | Tomato | cytosol | 58.47 | 20.18 |
| PGSC0003DMT400011491 | Potato | cytosol | 61.02 | 18.14 |
| PGSC0003DMT400047881 | Potato | cytosol | 59.32 | 17.63 |
| GSMUA_Achr11P... | Banana | cytosol | 56.78 | 17.31 |
| Os02t0595100-01 | Rice | golgi | 53.39 | 17.03 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 55.93 | 17.01 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 55.93 | 16.92 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 55.93 | 16.92 |
| KRH43122 | Soybean | cytosol | 55.93 | 16.88 |
| KRH31342 | Soybean | cytosol | 55.93 | 16.84 |
| Zm00001d003292_P001 | Maize | plasma membrane | 55.08 | 16.75 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 55.08 | 16.67 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 55.08 | 16.67 |
| KRH59271 | Soybean | cytosol | 55.08 | 16.62 |
| KRG97530 | Soybean | cytosol | 55.08 | 16.58 |
| Zm00001d050961_P001 | Maize | plasma membrane | 54.24 | 16.49 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 54.24 | 16.49 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 54.24 | 16.49 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 53.39 | 16.24 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 53.39 | 16.24 |
| Zm00001d017085_P002 | Maize | golgi | 53.39 | 16.24 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 53.39 | 16.24 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 53.39 | 16.24 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 53.39 | 16.15 |
| AT5G14480.1 | Thale cress | cytosol | 52.54 | 16.02 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 52.54 | 15.98 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 52.54 | 15.98 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 52.54 | 15.94 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 51.69 | 15.6 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 50.0 | 15.21 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 50.0 | 15.17 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 51.69 | 14.29 |
| VIT_01s0137g00810.t01 | Wine grape | cytosol | 61.02 | 10.88 |
| AT2G13290.1 | Thale cress | golgi | 32.2 | 10.53 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 3.39 | 3.42 |
Protein Annotations
| KEGG:00510+2.4.1.144 | MapMan:35.2 | EntrezGene:822249 | ProteinID:AEE77161.1 | ArrayExpress:AT3G26445 | EnsemblPlantsGene:AT3G26445 |
| RefSeq:AT3G26445 | TAIR:AT3G26445 | RefSeq:AT3G26445-TAIR-G | EnsemblPlants:AT3G26445.1 | TAIR:AT3G26445.1 | UniProt:F4JCJ4 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_17 | RefSeq:NP_683596.1 | PFAM:PF04724 |
| PO:PO:0000293 | PANTHER:PTHR12224 | PANTHER:PTHR12224:SF4 | UniParc:UPI0000163558 | : | : |
Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JCJ4]
Coordinates
chr3:-:9680120..9680746
Molecular Weight (calculated)
13669.9 Da
IEP (calculated)
7.504
GRAVY (calculated)
0.421
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIVVGVFDL ADSGTVFSIY RLCCVLRGVD MESYVFLLVI VPTFVLADLL IMSDVDEIPS RHTVNLLRWC NEITQIPHLR LKNSLYSFEF LLDNKSWRAS
101: VHRFQMGKTR YAHYPLSI
101: VHRFQMGKTR YAHYPLSI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.