Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G336600.1 | Wheat | cytosol | 98.45 | 98.45 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 98.2 | 98.2 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 28.09 | 93.16 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 89.18 | 89.18 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 95.1 | 86.42 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 85.82 | 85.82 |
| Zm00001d003292_P001 | Maize | plasma membrane | 85.31 | 85.31 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 79.38 | 78.97 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 78.35 | 78.15 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 77.84 | 77.84 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 76.8 | 76.8 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 76.55 | 76.55 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 75.52 | 75.32 |
| Bra039107.1-P | Field mustard | cytosol | 53.09 | 69.13 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 67.01 | 67.18 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 66.75 | 66.75 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 67.01 | 66.67 |
| Bra025284.1-P | Field mustard | cytosol | 66.49 | 66.32 |
| CDY13721 | Canola | cytosol | 66.49 | 66.32 |
| AT1G12990.1 | Thale cress | cytosol | 66.49 | 65.82 |
| KRH31342 | Soybean | cytosol | 66.49 | 65.82 |
| KRG97530 | Soybean | cytosol | 66.49 | 65.82 |
| CDX83706 | Canola | cytosol, golgi, plasma membrane | 65.98 | 65.81 |
| Bra004065.1-P | Field mustard | cytosol, endoplasmic reticulum, mitochondrion | 56.96 | 65.58 |
| CDY21077 | Canola | cytosol | 66.24 | 65.56 |
| AT5G14480.1 | Thale cress | cytosol | 65.21 | 65.37 |
| Bra016746.1-P | Field mustard | cytosol | 65.98 | 65.31 |
| CDX69577 | Canola | cytosol | 64.95 | 65.12 |
| CDY09858 | Canola | cytosol | 64.95 | 65.12 |
| CDY34597 | Canola | cytosol | 65.72 | 65.05 |
| Bra008753.1-P | Field mustard | cytosol | 64.69 | 64.86 |
| KRH59271 | Soybean | cytosol | 65.21 | 64.71 |
| Bra019802.1-P | Field mustard | cytosol | 64.95 | 64.62 |
| PGSC0003DMT400032896 | Potato | cytosol, golgi, plasma membrane | 64.43 | 64.43 |
| KRH43122 | Soybean | cytosol | 64.69 | 64.19 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 64.18 | 64.18 |
| CDY37511 | Canola | golgi | 63.14 | 64.14 |
| CDY49064 | Canola | golgi, plasma membrane, plastid | 63.4 | 64.06 |
| Bra006256.1-P | Field mustard | cytosol | 63.92 | 63.92 |
| CDX91060 | Canola | cytosol, golgi, plasma membrane | 63.92 | 63.92 |
| Bra023467.1-P | Field mustard | cytosol, golgi, peroxisome | 63.92 | 63.92 |
| CDY68430 | Canola | cytosol, golgi, peroxisome | 63.92 | 63.92 |
| CDX98021 | Canola | cytosol | 64.69 | 63.87 |
| CDY19406 | Canola | cytosol | 64.43 | 63.78 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 63.4 | 63.73 |
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 63.66 | 63.66 |
| CDX70567 | Canola | cytosol | 63.4 | 63.57 |
| PGSC0003DMT400040682 | Potato | cytosol | 63.14 | 63.14 |
| PGSC0003DMT400047881 | Potato | cytosol | 64.43 | 62.97 |
| Solyc12g035470.1.1 | Tomato | cytosol | 62.63 | 62.63 |
| AT1G67880.1 | Thale cress | golgi | 62.11 | 61.79 |
| CDY28838 | Canola | golgi | 62.11 | 61.48 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 65.21 | 61.26 |
| CDY56530 | Canola | golgi | 61.86 | 61.22 |
| PGSC0003DMT400011491 | Potato | cytosol | 62.63 | 61.21 |
| Solyc05g013580.2.1 | Tomato | cytosol | 51.8 | 58.77 |
| AT3G26445.1 | Thale cress | extracellular, golgi | 16.24 | 53.39 |
| TraesCS5A01G046600.1 | Wheat | golgi, mitochondrion, plastid | 46.13 | 48.91 |
| TraesCS6A01G077400.1 | Wheat | mitochondrion | 39.43 | 41.69 |
| VIT_01s0137g00810.t01 | Wine grape | cytosol | 67.27 | 39.43 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G326200.1 | EnsemblPlantsGene:TraesCS2A01G326200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019538 | InterPro:Glyco_trans_17 | KEGG:00510+2.4.1.144 |
| PANTHER:PTHR12224 | PANTHER:PTHR12224:SF5 | PFAM:PF04724 | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2A:+:557046248..557049719
Molecular Weight (calculated)
45652.0 Da
IEP (calculated)
8.149
GRAVY (calculated)
-0.275
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEAGRYTHK KDDGICNSVC GEPTSKAVMA MSRLKCALRG FDFRVLLALL IGVPLVMLMI YAHGQKVTYF LRPIWESPPE PFKIIPHYYN ENVTMENLCK
101: LHGWKVRETP RRVFDAVLFS NELDILELRW NELSPYVSEF VLLESNSTFT GVVKPLYFKE NRHRFRFAES RLTYGTYGGR FMKGENPFVE ESFQRVALDQ
201: LIRIARIEND DILIMSDVDE IPSGHTINLL RWCDDTPKIL HLQLRNYLYS FEFFLDDKSW RASIHRYVSG KTRYAHFRQT DQLLADSGWH CSFCFRHISD
301: FAFKMKAYSH VDRIRFKYFL NPERIQDVIC RGADLFDMLP EEYTFQEIIA KLGNIPSTFS AVHLPSYLLQ NFDRYRYLLP GNCRRESG
101: LHGWKVRETP RRVFDAVLFS NELDILELRW NELSPYVSEF VLLESNSTFT GVVKPLYFKE NRHRFRFAES RLTYGTYGGR FMKGENPFVE ESFQRVALDQ
201: LIRIARIEND DILIMSDVDE IPSGHTINLL RWCDDTPKIL HLQLRNYLYS FEFFLDDKSW RASIHRYVSG KTRYAHFRQT DQLLADSGWH CSFCFRHISD
301: FAFKMKAYSH VDRIRFKYFL NPERIQDVIC RGADLFDMLP EEYTFQEIIA KLGNIPSTFS AVHLPSYLLQ NFDRYRYLLP GNCRRESG
001: MWWMMGEAGG HYCSKKTDDI CGGVCSQEPG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYVHGQK ISYFLRPLWE SPPKPFHDIP HYYHENASME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE
Arabidopsis Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4HP06]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.