Factsheet for Bra006256.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78579	Canola	cytosol, golgi, plasma membrane	98.97	98.97
Bra008753.1-P	Field mustard	cytosol	91.24	91.47
AT5G14480.1	Thale cress	cytosol	91.24	91.47
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	90.21	90.21
Bra039107.1-P	Field mustard	cytosol	63.4	82.55
Bra025284.1-P	Field mustard	cytosol	76.29	76.09
Bra004065.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	65.98	75.96
KRG94031	Soybean	cytosol, golgi, plasma membrane	75.52	75.71
KRG93199	Soybean	cytosol, golgi, plasma membrane	74.23	74.61
HORVU2Hr1G082670.1	Barley	cytosol	21.91	72.65
PGSC0003DMT400040682	Potato	cytosol	71.91	71.91
Bra016746.1-P	Field mustard	cytosol	72.42	71.68
Solyc12g035470.1.1	Tomato	cytosol	71.65	71.65
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	76.03	71.43
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	70.88	70.88
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	70.62	70.62
Bra019802.1-P	Field mustard	cytosol	70.62	70.26
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	67.78	67.61
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	67.53	67.53
Os02t0595100-01	Rice	golgi	64.18	67.3
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	67.27	66.92
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	67.01	66.67
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	66.75	66.58
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	66.24	66.24
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	66.49	66.15
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	66.49	66.15
EES12371	Sorghum	cytosol, golgi, plasma membrane	65.72	65.72
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	65.46	65.46
KXG30544	Sorghum	cytosol, golgi, plasma membrane	64.95	64.95
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	64.95	64.95
Zm00001d003292_P001	Maize	plasma membrane	64.95	64.95
Zm00001d017085_P002	Maize	golgi	64.95	64.95
Zm00001d050961_P001	Maize	plasma membrane	64.95	64.95
GSMUA_Achr11P...	Banana	cytosol	64.69	64.86
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	65.21	64.71
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	63.92	63.92
TraesCS2D01G336600.1	Wheat	cytosol	63.92	63.92
TraesCS2B01G355800.1	Wheat	cytosol	63.66	63.66
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	63.4	57.61
Bra037205.1-P	Field mustard	golgi	48.2	51.52

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EnsemblPlantsGene:Bra006256	EnsemblPlants:Bra006256.1	EnsemblPlants:Bra006256.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:M4CPW7	PFAM:PF04724	PANTHER:PTHR12224
PANTHER:PTHR12224:SF1	TMHMM:TMhelix	UniParc:UPI000253FB4F	:	:	:

Description

AT5G14480 (E=8e-218) | glycosyl transferase family 17 protein

Coordinates

chrA03:+:2714295..2715717

Molecular Weight (calculated)

45104.1 Da

IEP (calculated)

8.251

GRAVY (calculated)

-0.326

Length

388 amino acids

Sequence
(BLAST)

001: MSDGYYSCKK TDDICEDVCG QDGSRAAKAF SRVRCVLRGL DFKTYIIFLT IVPIFSLGGY LHGQKLTYFL RPLWESPPKP FQTLPHYYHH NASMETLCSL
101: HGWTHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYVTQFV ILESNSTFTG LPKPLVFAAN REKNFEFVEP RLTYGNIGGR FKRGENPFVE EAYQRIALDQ
201: LIGLAGIQED DLLIMSDVDE IPSAHTINLL RWCDGYPPVL HLQLKNYLYS FEYFVDNKSW RASVHLYKPG KTRYAHFRRG DTLLADSGWH CSFCFRRISE
301: FVFKMKAYSH NDRVRFSHYL NPKRIQDVIC RGTDLFDMLP EEHTFREIIG KLGPIPRSYS AVHLPGHLIE KAESYKYLLP GNCVRDSG

Best Arabidopsis Sequence Match ( AT5G14480.1 )
(BLAST)

001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG

Arabidopsis Description

At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.