Factsheet for Bra016746.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
plastid 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21077	Canola	cytosol	99.74	99.74
AT1G12990.1	Thale cress	cytosol	95.41	95.41
Bra019802.1-P	Field mustard	cytosol	92.6	93.08
Bra004065.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	73.47	85.46
KRH59271	Soybean	cytosol	78.57	78.77
KRH43122	Soybean	cytosol	78.57	78.77
KRG97530	Soybean	cytosol	78.32	78.32
KRH31342	Soybean	cytosol	78.32	78.32
PGSC0003DMT400011491	Potato	cytosol	77.3	76.32
PGSC0003DMT400047881	Potato	cytosol	76.79	75.82
Bra025284.1-P	Field mustard	cytosol	72.19	72.75
Bra006256.1-P	Field mustard	cytosol	71.68	72.42
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	71.43	72.16
Bra039107.1-P	Field mustard	cytosol	54.59	71.81
Bra008753.1-P	Field mustard	cytosol	70.41	71.32
HORVU2Hr1G082670.1	Barley	cytosol	21.17	70.94
Solyc05g013580.2.1	Tomato	cytosol	61.22	70.18
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	67.35	67.69
KXG30544	Sorghum	cytosol, golgi, plasma membrane	66.84	67.53
Zm00001d050961_P001	Maize	plasma membrane	66.84	67.53
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	67.09	67.44
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	67.09	67.44
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	66.84	67.35
EES12371	Sorghum	cytosol, golgi, plasma membrane	66.58	67.27
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	66.84	67.18
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	66.33	67.01
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	66.33	67.01
Zm00001d017085_P002	Maize	golgi	66.07	66.75
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	66.07	66.75
GSMUA_Achr11P...	Banana	cytosol	65.82	66.67
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	65.82	66.49
TraesCS2D01G336600.1	Wheat	cytosol	65.82	66.49
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	65.82	66.32
TraesCS2B01G355800.1	Wheat	cytosol	65.56	66.24
Zm00001d003292_P001	Maize	plasma membrane	65.56	66.24
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	65.82	65.98
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	65.31	65.98
Os02t0595100-01	Rice	golgi	62.24	65.95
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	64.8	59.48
Bra037205.1-P	Field mustard	golgi	50.26	54.27
VIT_01s0137g00810.t01	Wine grape	cytosol	81.89	48.49

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EnsemblPlantsGene:Bra016746	EnsemblPlants:Bra016746.1	EnsemblPlants:Bra016746.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:M4DJR8	PFAM:PF04724	PANTHER:PTHR12224
PANTHER:PTHR12224:SF4	TMHMM:TMhelix	UniParc:UPI0002545E74	:	:	:

Description

AT1G12990 (E=6e-234) | glycosyl transferase family 17 protein

Coordinates

chrA08:-:19786938..19788324

Molecular Weight (calculated)

45884.3 Da

IEP (calculated)

7.889

GRAVY (calculated)

-0.245

Length

392 amino acids

Sequence
(BLAST)

001: MWWMMGEAGG HYCSKKTDSI CGGVCSQETG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYIHGQK ISYFLRPLWE SPPKPFHDIP HYHHENATME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELYPY ITQFVLLESN STFTGLPKPL VFAAHRDEFE FVEPRLTYGS LGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEV PKILHLRLKN YLYSFEFLVD NKSWRASVHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF SHFLNPKRVQ RVICKGADLF DMLPEEYTFK DIIGKMGPIP HSFSAVHLPS YLLENAEKYR FLLPGNCVRE SE

Best Arabidopsis Sequence Match ( AT1G12990.1 )
(BLAST)

001: MWWMMGEAGG HYCSKKTDDI CGGVCSQEPG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYVHGQK ISYFLRPLWE SPPKPFHDIP HYYHENASME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4HP06]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.