Factsheet for Bra039107.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
extracellular 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37511	Canola	golgi	99.33	77.49
CDY49064	Canola	golgi, plasma membrane, plastid	98.66	76.56
HORVU2Hr1G082670.1	Barley	cytosol	29.19	74.36
AT3G01620.1	Thale cress	cytosol, golgi, plasma membrane	88.93	68.3
Bra004065.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	73.15	64.69
Bra006256.1-P	Field mustard	cytosol	82.55	63.4
Bra008753.1-P	Field mustard	cytosol	81.88	63.05
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	81.21	62.37
Bra025284.1-P	Field mustard	cytosol	76.51	58.61
KRG94031	Soybean	cytosol, golgi, plasma membrane	74.5	57.36
KRG93199	Soybean	cytosol, golgi, plasma membrane	73.83	56.99
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	73.15	56.19
Solyc12g035470.1.1	Tomato	cytosol	73.15	56.19
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	72.82	55.93
PGSC0003DMT400040682	Potato	cytosol	72.82	55.93
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	72.15	55.41
Os02t0595100-01	Rice	golgi	68.79	55.41
Bra016746.1-P	Field mustard	cytosol	71.81	54.59
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	75.17	54.24
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	70.47	54.12
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	69.8	53.47
Bra019802.1-P	Field mustard	cytosol	69.8	53.33
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	69.46	53.21
TraesCS2D01G336600.1	Wheat	cytosol	69.13	53.09
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	69.13	53.09
GSMUA_Achr11P...	Banana	cytosol	68.79	52.97
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	68.79	52.84
TraesCS2B01G355800.1	Wheat	cytosol	68.79	52.84
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	68.79	52.84
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	69.13	52.82
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	69.13	52.69
KXG30544	Sorghum	cytosol, golgi, plasma membrane	68.46	52.58
EES12371	Sorghum	cytosol, golgi, plasma membrane	68.46	52.58
Zm00001d003292_P001	Maize	plasma membrane	68.46	52.58
Zm00001d050961_P001	Maize	plasma membrane	68.46	52.58
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	68.79	52.56
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	68.79	52.56
Zm00001d017085_P002	Maize	golgi	68.12	52.32
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	68.46	52.31
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	68.46	47.78
Bra037205.1-P	Field mustard	golgi	54.03	44.35

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EnsemblPlantsGene:Bra039107	EnsemblPlants:Bra039107.1	EnsemblPlants:Bra039107.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:M4FDD6	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1
UniParc:UPI000254786A	SEG:seg	:	:	:	:

Description

AT3G01620 (E=4e-153) | glycosyl transferase family 17 protein

Coordinates

chrA05:-:23922296..23923192

Molecular Weight (calculated)

34894.7 Da

IEP (calculated)

8.542

GRAVY (calculated)

-0.389

Length

298 amino acids

Sequence
(BLAST)

001: MELLCTLHGW NIRHSPRRVF DAVLFSNEVD MLTIRWNELN PYITQFVLLE SNSTFTGLSK PLAFADNRHK SFEFVEPTRL SYGHVGGGGR WKKGENPFLE
101: ESFQRLALDQ LIKLAGIKED DLLIMSDVDE IPSGHTINLL RWCDGYPPVL HLQLRNYLYS YEYYLDSKSW RASVHLYKPG KTRYAHFRQS NSLLADSGWH
201: CSFCFRHIRD FVFKMKAYSH TDRVRFSHYL NPKRIQDVIC KGTDLFDMFP EEHTFREIIG KLGPIPRSYS AVHLPRYLIQ NADSYKYLLP GNCVRETA

Best Arabidopsis Sequence Match ( AT1G12990.1 )
(BLAST)

001: MWWMMGEAGG HYCSKKTDDI CGGVCSQEPG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYVHGQK ISYFLRPLWE SPPKPFHDIP HYYHENASME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4HP06]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.