Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plastid 1
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040682 | Potato | cytosol | 97.94 | 97.94 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 82.47 | 82.47 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 76.55 | 76.74 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 73.97 | 74.35 |
| AT5G14480.1 | Thale cress | cytosol | 73.71 | 73.9 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 78.61 | 73.85 |
| CDY09858 | Canola | cytosol | 73.45 | 73.64 |
| Bra039107.1-P | Field mustard | cytosol | 56.19 | 73.15 |
| CDX69577 | Canola | cytosol | 72.94 | 73.13 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 73.45 | 73.08 |
| Bra008753.1-P | Field mustard | cytosol | 72.42 | 72.61 |
| CDX70567 | Canola | cytosol | 72.16 | 72.35 |
| CDX83706 | Canola | cytosol, golgi, plasma membrane | 72.42 | 72.24 |
| Bra025284.1-P | Field mustard | cytosol | 72.42 | 72.24 |
| CDX91060 | Canola | cytosol, golgi, plasma membrane | 72.16 | 72.16 |
| CDY13721 | Canola | cytosol | 72.16 | 71.98 |
| Bra023467.1-P | Field mustard | cytosol, golgi, peroxisome | 71.65 | 71.65 |
| Bra006256.1-P | Field mustard | cytosol | 71.65 | 71.65 |
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 71.65 | 71.65 |
| CDY68430 | Canola | cytosol, golgi, peroxisome | 71.65 | 71.65 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 71.39 | 71.39 |
| Solyc05g013580.2.1 | Tomato | cytosol | 61.86 | 70.18 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 20.88 | 69.23 |
| CDY49064 | Canola | golgi, plasma membrane, plastid | 68.04 | 68.75 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 68.56 | 68.56 |
| CDY37511 | Canola | golgi | 66.75 | 67.8 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 67.78 | 67.61 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 67.53 | 67.53 |
| GSMUA_Achr11P... | Banana | cytosol | 67.27 | 67.44 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 66.75 | 66.41 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 66.49 | 66.15 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 66.24 | 65.9 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 66.24 | 65.9 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 65.98 | 65.81 |
| Os02t0595100-01 | Rice | golgi | 62.11 | 65.14 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 64.95 | 64.95 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 64.95 | 64.95 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 64.95 | 64.95 |
| Zm00001d003292_P001 | Maize | plasma membrane | 64.95 | 64.95 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 63.92 | 63.92 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 64.18 | 63.68 |
| Zm00001d050961_P001 | Maize | plasma membrane | 63.4 | 63.4 |
| Zm00001d017085_P002 | Maize | golgi | 62.89 | 62.89 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 62.63 | 62.63 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 62.63 | 62.63 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 62.37 | 62.37 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 62.89 | 57.14 |
| Solyc07g008030.1.1 | Tomato | mitochondrion | 49.48 | 51.47 |
Protein Annotations
| KEGG:00510+2.4.1.144 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0019538 | InterPro:Glyco_trans_17 |
| UniProt:K4DE08 | PFAM:PF04724 | PANTHER:PTHR12224 | PANTHER:PTHR12224:SF1 | EnsemblPlantsGene:Solyc12g035470.1 | EnsemblPlants:Solyc12g035470.1.1 |
| TMHMM:TMhelix | UniParc:UPI0002769E77 | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:58235839..58237541
Molecular Weight (calculated)
45571.8 Da
IEP (calculated)
7.599
GRAVY (calculated)
-0.338
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGYYYTSK KSDDICPDVC GQQDSPTTLS MSRLRCMLRG LDLKALIFLV VFVPMFIVGA YLHGQKITYF LRPLWQSPPK PFIEITHYYH ENVPMEDICK
101: LHGWGIREYP RRVFDAVLFS NEVDMLKIRW KELYPYITQI VLLESNSTFT GLAKLHNFAL NRDQFKFIEP RLAYGNIAGR DKKGENPFVE EAYQRVALDQ
201: LLKLAGIEDD DLLIMSDVDE IPSARTINLL RWCDDIPHVL HLHLKNYLYS FEFQIKHRSW RASVHRYQSG KTRYAHYRQS DYILADAGWH CSFCFRHISD
301: FIFKMKAYSH SDRVRFSHYL NPTRIQDVIC KGADLYDMLP EEYTFKDIIG NMGPIPHSYS AIDLPSYLFE NPDKYKYLLP GNCKRENG
101: LHGWGIREYP RRVFDAVLFS NEVDMLKIRW KELYPYITQI VLLESNSTFT GLAKLHNFAL NRDQFKFIEP RLAYGNIAGR DKKGENPFVE EAYQRVALDQ
201: LLKLAGIEDD DLLIMSDVDE IPSARTINLL RWCDDIPHVL HLHLKNYLYS FEFQIKHRSW RASVHRYQSG KTRYAHYRQS DYILADAGWH CSFCFRHISD
301: FIFKMKAYSH SDRVRFSHYL NPTRIQDVIC KGADLYDMLP EEYTFKDIIG NMGPIPHSYS AIDLPSYLFE NPDKYKYLLP GNCKRENG
001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
Arabidopsis Description
At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.