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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13721 Canola cytosol 96.92 96.92
AT3G27540.1 Thale cress cytosol, golgi, plasma membrane 88.69 88.46
CDX91060 Canola cytosol, golgi, plasma membrane 78.66 78.87
CDY68430 Canola cytosol, golgi, peroxisome 77.38 77.58
CDX69577 Canola cytosol 76.35 76.74
CDY09858 Canola cytosol 76.09 76.49
CDX70567 Canola cytosol 75.84 76.23
CDX78579 Canola cytosol, golgi, plasma membrane 75.58 75.77
KRG94031 Soybean cytosol, golgi, plasma membrane 75.32 75.71
KRG93199 Soybean cytosol, golgi, plasma membrane 72.49 73.06
PGSC0003DMT400040682 Potato cytosol 72.75 72.94
Solyc12g035470.1.1 Tomato cytosol 72.24 72.42
CDY21077 Canola cytosol 72.75 72.19
CDY49064 Canola golgi, plasma membrane, plastid 71.21 72.14
CDY34597 Canola cytosol 72.49 71.94
PGSC0003DMT400032896 Potato cytosol, golgi, plasma membrane 71.72 71.91
CDY37511 Canola golgi 70.44 71.73
CDY19406 Canola cytosol 72.24 71.68
Solyc02g093430.2.1 Tomato cytosol, golgi, plasma membrane 71.47 71.65
CDY56530 Canola golgi 71.72 71.17
CDY28838 Canola golgi 71.72 71.17
HORVU2Hr1G082670.1 Barley cytosol 21.34 70.94
CDX98021 Canola cytosol 71.47 70.74
VIT_14s0066g00350.t01 Wine grape cytosol, golgi, plasma membrane 73.78 69.49
GSMUA_Achr8P28540_001 Banana cytosol, golgi, plasma membrane 68.64 68.64
GSMUA_Achr10P... Banana cytosol, golgi, plasma membrane 67.87 68.04
Os02t0595100-01 Rice golgi 64.52 67.84
EES12371 Sorghum cytosol, golgi, plasma membrane 67.61 67.78
TraesCS6D01G192500.1 Wheat cytosol, golgi, plasma membrane 67.87 67.69
GSMUA_Achr6P12150_001 Banana cytosol, golgi, plasma membrane 67.35 67.53
GSMUA_Achr11P... Banana cytosol 67.1 67.44
TraesCS6A01G209000.1 Wheat cytosol, golgi, plasma membrane 67.61 67.44
Os04t0477500-02 Rice cytosol, golgi, plasma membrane 67.1 67.27
Zm00001d003292_P001 Maize plasma membrane 66.84 67.01
TraesCS6B01G238000.1 Wheat cytosol, golgi, plasma membrane 67.1 66.92
HORVU6Hr1G053550.2 Barley cytosol, golgi, plasma membrane 66.84 66.67
KXG30544 Sorghum cytosol, golgi, plasma membrane 66.07 66.24
Zm00001d050961_P001 Maize plasma membrane 65.81 65.98
TraesCS2A01G326200.1 Wheat cytosol, golgi, plasma membrane 65.81 65.98
GSMUA_Achr9P07530_001 Banana cytosol, golgi, plasma membrane 65.81 65.81
Zm00001d017085_P002 Maize golgi 65.55 65.72
TraesCS2D01G336600.1 Wheat cytosol 65.55 65.72
Os02t0594900-01 Rice cytosol, golgi, plasma membrane 65.81 65.47
TraesCS2B01G355800.1 Wheat cytosol 65.3 65.46
GSMUA_Achr6P28040_001 Banana cytosol, golgi, plasma membrane 64.78 64.95
HORVU2Hr1G082660.5 Barley golgi, mitochondrion 65.81 59.95
CDX81440 Canola golgi 50.13 54.17
CDX81441 Canola golgi 50.39 53.99
CDY37205 Canola golgi 50.39 53.99
Protein Annotations
KEGG:00500+2.4.1.14KEGG:00510+2.4.1.144MapMan:35.2GO:A0A078D2U1EnsemblPlants:CDX83706ProteinID:CDX83706
ProteinID:CDX83706.1GO:GO:0003674GO:GO:0003824GO:GO:0003830GO:GO:0005575GO:GO:0005975
GO:GO:0006464GO:GO:0006487GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00139412001InterPro:Glyco_trans_17PFAM:PF04724
PANTHER:PTHR12224PANTHER:PTHR12224:SF1MetaCyc:PWY-7238MetaCyc:PWY-7347MetaCyc:PWY-7426TMHMM:TMhelix
UniPathway:UPA00378UniParc:UPI0001B6382B::::
Description
BnaC07g24460D
Coordinates
chrLK031833:+:1726310..1728349
Molecular Weight (calculated)
45590.7 Da
IEP (calculated)
8.094
GRAVY (calculated)
-0.296
Length
389 amino acids
Sequence
(BLAST)
001: MSDGYYNSKK TDDICDDVCG QQGSKAAATI SRLKCVLRGF DVRTLLCLFI LMPFAIFAIY LHGQKLTYFF RPLWESPPKP FHTIPHYHTE NATMQSLCRL
101: HGWGVRDSPR RVYDAVLFSN EIDLLTVRWK ELYPYVTQFV LLESNSTFTG LPKPFVFKSN KDQFAFVEER LTYGNIGGRF RKGENPFVEE AFQRVALDKL
201: LRIAGIEEDD LLIMSDVDEI PSVHTINLLR WCDDIPPVLH LQLKNYLYSF EYYVDSKSWR ASVHRYSPGK TRYAHFRQSD VMLSDSGWHC SFCFRYINDF
301: VFKMKAYSHS DRVRFSHYLN PIRIQDVICK GTDLFDMLPE EYTFKEMIGK MGPVPRSYSA VHLPSYLLEN AEKYKYLLPG NCVRERQTW
Best Arabidopsis Sequence Match ( AT3G27540.1 )
(BLAST)
001: MSDGYINSKK TDDICEDVCG QGSKAAKTIS RLKCVLKGFD LRTYLFLFVL MPFGILAIYL HGQKFTYFFR PLWESPPKPF QTIPHYYNEN VTMESLCSLH
101: GWGIRDSPRR VFDAVLFSNE KDLLTVRWNE LYPYVTQFVI LESNSTFTGL PKPLVFKSNK DQFKFVEPRL TYGTIGGRFR KGENPFVEEA YQRVALDQLL
201: RIAGIQEDDL LIMSDVDEIP SAHTINLLRW CDDIPPVLHL QLKNYLYSFE YYVDSKSWRA SIHRYSPGKT RYAHFRQSNV MLADSGWHCS FCFRYISEFI
301: FKMKAYSHSD RVRFSHYLNP RRIQDVICKG TDLFDMLPEE YTFKEIIGKM GPVPRSYSAV HLPSYLLYNA EQYKYLLPGN CIREKQTGFI
Arabidopsis Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT58]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.