CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, nucleus
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025284.1-P	Field mustard	cytosol	99.74	99.74
CDX83706	Canola	cytosol, golgi, plasma membrane	96.92	96.92
AT3G27540.1	Thale cress	cytosol, golgi, plasma membrane	88.69	88.46
CDX91060	Canola	cytosol, golgi, plasma membrane	78.92	79.12
CDY68430	Canola	cytosol, golgi, peroxisome	77.89	78.09
CDX69577	Canola	cytosol	77.12	77.52
CDY09858	Canola	cytosol	76.86	77.26
CDX78579	Canola	cytosol, golgi, plasma membrane	76.35	76.55
CDX70567	Canola	cytosol	75.84	76.23
KRG94031	Soybean	cytosol, golgi, plasma membrane	75.32	75.71
KRG93199	Soybean	cytosol, golgi, plasma membrane	72.24	72.8
PGSC0003DMT400040682	Potato	cytosol	72.49	72.68
CDY49064	Canola	golgi, plasma membrane, plastid	71.47	72.4
Solyc12g035470.1.1	Tomato	cytosol	71.98	72.16
CDY37511	Canola	golgi	70.69	71.99
CDY21077	Canola	cytosol	72.24	71.68
CDY34597	Canola	cytosol	71.98	71.43
CDY19406	Canola	cytosol	71.98	71.43
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	71.21	71.39
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	70.95	71.13
HORVU2Hr1G082670.1	Barley	cytosol	21.34	70.94
CDY28838	Canola	golgi	71.47	70.92
CDY56530	Canola	golgi	71.21	70.66
CDX98021	Canola	cytosol	71.21	70.48
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	68.89	68.89
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	72.75	68.52
Os02t0595100-01	Rice	golgi	64.78	68.11
EES12371	Sorghum	cytosol, golgi, plasma membrane	67.87	68.04
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	67.61	67.78
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	67.87	67.69
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	67.35	67.53
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	67.61	67.44
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	67.1	67.27
Zm00001d003292_P001	Maize	plasma membrane	67.1	67.27
GSMUA_Achr11P...	Banana	cytosol	66.84	67.18
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	67.35	67.18
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	66.84	66.67
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	66.32	66.49
KXG30544	Sorghum	cytosol, golgi, plasma membrane	66.07	66.24
TraesCS2D01G336600.1	Wheat	cytosol	66.07	66.24
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	66.32	65.98
TraesCS2B01G355800.1	Wheat	cytosol	65.81	65.98
Zm00001d050961_P001	Maize	plasma membrane	65.81	65.98
Zm00001d017085_P002	Maize	golgi	65.55	65.72
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	65.3	65.3
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	64.52	64.69
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	66.32	60.42
CDX81440	Canola	golgi	49.36	53.33
CDX81441	Canola	golgi	49.61	53.17
CDY37205	Canola	golgi	49.61	53.17

Protein Annotations

KEGG:00500+2.4.1.14	KEGG:00510+2.4.1.144	MapMan:35.2	GO:A0A078FKP1	UniProt:A0A078FKP1	EnsemblPlants:CDY13721
ProteinID:CDY13721	ProteinID:CDY13721.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00078146001
InterPro:Glyco_trans_17	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	MetaCyc:PWY-7238	MetaCyc:PWY-7347
MetaCyc:PWY-7426	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EDBF6B	:	:

Description

BnaA06g32020DBnaA06g32020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKP1]

Coordinates

chrLK032037:+:762930..764771

Molecular Weight (calculated)

45418.4 Da

IEP (calculated)

8.094

GRAVY (calculated)

-0.328

Length

389 amino acids

Sequence
(BLAST)

001: MSDGYYNSKK TDDICDDVCG QQGSKAGATI SRLKCVLRGF DVRTLLCLFI LVPFAIFAIY LHGQKLTYFF RPLWESPPKP FHTIPHYHTE NATMQSLCSL
101: HGWGVRDSPR RVYDAVLFSN EKDLLTVRWK ELYPYVTQFV LLESNSTFTG LPKPFVFKSN KEQFSFVEER LTYGNIGGRF RKGENPFVEE AFQRVALDKL
201: LRIAGIEEDD LLIMSDVDEI PSAHTINLLR WCDDIPPVLH LQLKNYLYSF EYYVDSKSWR ASIHRYNPGK TRYAHFRQSD VMLSDSGWHC SFCFRYINDF
301: VFKMKAYSHS DRVRFSHYLN PVRIQDVICK GTDLFDMLPE EYTFREMIGK MGPVPRSYSA VHLPSYLLEN AEKYKYLLPG NCVRERQTG

Best Arabidopsis Sequence Match ( AT3G27540.1 )
(BLAST)

001: MSDGYINSKK TDDICEDVCG QGSKAAKTIS RLKCVLKGFD LRTYLFLFVL MPFGILAIYL HGQKFTYFFR PLWESPPKPF QTIPHYYNEN VTMESLCSLH
101: GWGIRDSPRR VFDAVLFSNE KDLLTVRWNE LYPYVTQFVI LESNSTFTGL PKPLVFKSNK DQFKFVEPRL TYGTIGGRFR KGENPFVEEA YQRVALDQLL
201: RIAGIQEDDL LIMSDVDEIP SAHTINLLRW CDDIPPVLHL QLKNYLYSFE YYVDSKSWRA SIHRYSPGKT RYAHFRQSNV MLADSGWHCS FCFRYISEFI
301: FKMKAYSHSD RVRFSHYLNP RRIQDVICKG TDLFDMLPEE YTFKEIIGKM GPVPRSYSAV HLPSYLLYNA EQYKYLLPGN CIREKQTGFI

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT58]
SUBAcon: [cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.