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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004065.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion 85.71 99.7
CDY28838 Canola golgi 98.21 98.21
AT1G67880.1 Thale cress golgi 92.86 93.33
CDY21077 Canola cytosol 83.16 83.16
CDY34597 Canola cytosol 82.91 82.91
CDY19406 Canola cytosol 82.65 82.65
CDX98021 Canola cytosol 82.65 82.44
KRH43122 Soybean cytosol 78.06 78.26
KRH59271 Soybean cytosol 78.06 78.26
KRG97530 Soybean cytosol 77.3 77.3
KRH31342 Soybean cytosol 76.53 76.53
PGSC0003DMT400011491 Potato cytosol 75.77 74.81
PGSC0003DMT400047881 Potato cytosol 75.51 74.56
CDX69577 Canola cytosol 71.68 72.61
CDY09858 Canola cytosol 71.17 72.09
CDX83706 Canola cytosol, golgi, plasma membrane 71.17 71.72
CDX70567 Canola cytosol 70.66 71.58
CDY68430 Canola cytosol, golgi, peroxisome 70.66 71.39
CDX91060 Canola cytosol, golgi, plasma membrane 70.66 71.39
CDX78579 Canola cytosol, golgi, plasma membrane 70.66 71.39
CDY13721 Canola cytosol 70.66 71.21
Solyc05g013580.2.1 Tomato cytosol 61.22 70.18
CDY37511 Canola golgi 65.31 67.02
CDY49064 Canola golgi, plasma membrane, plastid 65.56 66.93
HORVU2Hr1G082670.1 Barley cytosol 19.9 66.67
GSMUA_Achr11P... Banana cytosol 65.31 66.15
TraesCS6D01G192500.1 Wheat cytosol, golgi, plasma membrane 65.31 65.64
Os02t0595100-01 Rice golgi 61.73 65.41
TraesCS6A01G209000.1 Wheat cytosol, golgi, plasma membrane 65.05 65.38
HORVU6Hr1G053550.2 Barley cytosol, golgi, plasma membrane 64.8 65.13
TraesCS6B01G238000.1 Wheat cytosol, golgi, plasma membrane 64.8 65.13
GSMUA_Achr8P28540_001 Banana cytosol, golgi, plasma membrane 64.54 65.04
GSMUA_Achr9P07530_001 Banana cytosol, golgi, plasma membrane 64.29 64.78
EES12371 Sorghum cytosol, golgi, plasma membrane 63.52 64.18
GSMUA_Achr10P... Banana cytosol, golgi, plasma membrane 63.52 64.18
GSMUA_Achr6P12150_001 Banana cytosol, golgi, plasma membrane 63.52 64.18
KXG30544 Sorghum cytosol, golgi, plasma membrane 63.27 63.92
GSMUA_Achr6P28040_001 Banana cytosol, golgi, plasma membrane 63.27 63.92
Zm00001d050961_P001 Maize plasma membrane 62.76 63.4
Os04t0477500-02 Rice cytosol, golgi, plasma membrane 62.76 63.4
Zm00001d003292_P001 Maize plasma membrane 62.5 63.14
Zm00001d017085_P002 Maize golgi 62.5 63.14
Os02t0594900-01 Rice cytosol, golgi, plasma membrane 62.76 62.92
TraesCS2D01G336600.1 Wheat cytosol 61.99 62.63
TraesCS2B01G355800.1 Wheat cytosol 61.73 62.37
TraesCS2A01G326200.1 Wheat cytosol, golgi, plasma membrane 61.22 61.86
HORVU2Hr1G082660.5 Barley golgi, mitochondrion 60.97 55.97
CDX81440 Canola golgi 50.26 54.72
CDY37205 Canola golgi 50.51 54.55
CDX81441 Canola golgi 50.51 54.55
VIT_01s0137g00810.t01 Wine grape cytosol 78.06 46.22
Protein Annotations
KEGG:00500+2.4.1.14KEGG:00510+2.4.1.144MapMan:35.2GO:A0A078J0F6UniProt:A0A078J0F6EnsemblPlants:CDY56530
ProteinID:CDY56530ProteinID:CDY56530.1GO:GO:0003674GO:GO:0003824GO:GO:0003830GO:GO:0005575
GO:GO:0005975GO:GO:0006464GO:GO:0006487GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00019712001
InterPro:Glyco_trans_17PFAM:PF04724PANTHER:PTHR12224PANTHER:PTHR12224:SF4MetaCyc:PWY-7238MetaCyc:PWY-7347
MetaCyc:PWY-7426TMHMM:TMhelixUniPathway:UPA00378UniParc:UPI0004EDCAAE::
Description
BnaA07g38690DBnaA07g38690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0F6]
Coordinates
chrLK033496:-:55232..56731
Molecular Weight (calculated)
46068.5 Da
IEP (calculated)
7.400
GRAVY (calculated)
-0.330
Length
392 amino acids
Sequence
(BLAST)
001: MWWMMGENGG HYCSKKSDDL CGTQESDRGF GITRLCCMLR GIDLKSIIFL LVIFPMCVIG VYIHGLKISY FLRPLWESPP KPFHDIPHYH HENASMESLC
101: KLHGWGVREY PRRVYDAVLF STEVELLTIR WQELYPYVTQ FVLLESNSTF TGLPKPLVFA SHRADDEFKF VEPRLTYGSV GGRFKKGEKN PFYEEAYQRV
201: ALDQLLRLAG ITDDDLLIMS DVDEIPSRHT INLLRWCDDI PEILHLRLKN YLYSFEFPVD DKSWRASVHR YKTGKTKYAH YRQSDEILAD SGWHCSFCFR
301: RISEFVFKMK AYSHYDRVRF GHYLNPKRVQ RVICNGDDLF DMIPEEYTFK DIIGKMGPIP HSYSAVHLPA YLLENAERYK FLLPGNCLRD KE
Best Arabidopsis Sequence Match ( AT1G67880.1 )
(BLAST)
001: MWWMMGENGG HYCSKKSDDL CGTQESDRGF GISRLCCILR GVDLKSVLFL LVIMPMCVLG VYINALKISY FLRPLWESPP KPFHEIPHYH HENASMESLC
101: KLHGWRTREY PRRVYDAVLF STEVELLTIR WKELYPYVTQ FVLLESNSTF TGLPKPLVFA GHRDEFKFIE PRLTYGSIGG RFKKGEKNPF YEEAYQRIAL
201: DQLLRIAGIT DDDLLIMSDV DEIPSRHTIN LLRWCDDIPQ ILHLRLKNYL YSFEFPVDDK SWRASVHRYQ TGKTRYAHYR QSDVILADSG WHCSFCFRRI
301: SEFVFKMKAY SHYDRVRFAH YLNPKRVQRV ICSGSDLFDM IPEEYTFKDI IGKMGPIPHS YSAVHLPAYL LENAERYKFL LPGNCLRDEE
Arabidopsis Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V4]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.