Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 97.67 | 97.42 |
| CDX69577 | Canola | cytosol | 91.47 | 91.47 |
| CDY09858 | Canola | cytosol | 90.96 | 90.96 |
| AT5G14480.1 | Thale cress | cytosol | 90.18 | 90.18 |
| CDY68430 | Canola | cytosol, golgi, peroxisome | 89.92 | 89.69 |
| CDX91060 | Canola | cytosol, golgi, plasma membrane | 88.89 | 88.66 |
| CDY49064 | Canola | golgi, plasma membrane, plastid | 76.74 | 77.34 |
| CDY37511 | Canola | golgi | 75.45 | 76.44 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 76.23 | 76.23 |
| CDX83706 | Canola | cytosol, golgi, plasma membrane | 76.23 | 75.84 |
| CDY13721 | Canola | cytosol | 76.23 | 75.84 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 74.68 | 74.87 |
| PGSC0003DMT400040682 | Potato | cytosol | 72.61 | 72.42 |
| Solyc12g035470.1.1 | Tomato | cytosol | 72.35 | 72.16 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 76.74 | 71.91 |
| PGSC0003DMT400032896 | Potato | cytosol, golgi, plasma membrane | 71.32 | 71.13 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 21.45 | 70.94 |
| CDY34597 | Canola | cytosol | 71.83 | 70.92 |
| CDY21077 | Canola | cytosol | 71.83 | 70.92 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 71.06 | 70.88 |
| CDY56530 | Canola | golgi | 71.58 | 70.66 |
| CDY28838 | Canola | golgi | 71.58 | 70.66 |
| CDY19406 | Canola | cytosol | 71.06 | 70.15 |
| CDX98021 | Canola | cytosol | 70.28 | 69.21 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 67.96 | 67.78 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 67.7 | 67.35 |
| Os02t0595100-01 | Rice | golgi | 64.34 | 67.3 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 67.44 | 66.92 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 67.18 | 66.84 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 67.18 | 66.67 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 66.67 | 66.49 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 66.93 | 66.41 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 66.41 | 65.9 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 65.37 | 65.21 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 65.37 | 65.21 |
| Zm00001d050961_P001 | Maize | plasma membrane | 65.12 | 64.95 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 65.12 | 64.95 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 65.12 | 64.95 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 65.37 | 64.71 |
| Zm00001d017085_P002 | Maize | golgi | 64.86 | 64.69 |
| GSMUA_Achr11P... | Banana | cytosol | 64.6 | 64.6 |
| Zm00001d003292_P001 | Maize | plasma membrane | 64.6 | 64.43 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 63.57 | 63.4 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 63.57 | 63.4 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 63.31 | 63.14 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 63.05 | 57.14 |
| CDX81440 | Canola | golgi | 47.8 | 51.39 |
| CDY37205 | Canola | golgi | 47.55 | 50.69 |
| CDX81441 | Canola | golgi | 47.55 | 50.69 |
Protein Annotations
| KEGG:00500+2.4.1.14 | KEGG:00510+2.4.1.144 | MapMan:35.2 | GO:A0A078C1F7 | EnsemblPlants:CDX70567 | ProteinID:CDX70567 |
| ProteinID:CDX70567.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00140408001 | InterPro:Glyco_trans_17 | PFAM:PF04724 |
| PANTHER:PTHR12224 | PANTHER:PTHR12224:SF1 | MetaCyc:PWY-7238 | MetaCyc:PWY-7347 | MetaCyc:PWY-7426 | TMHMM:TMhelix |
| UniPathway:UPA00378 | UniParc:UPI0004EE105C | SEG:seg | : | : | : |
Description
BnaC03g06510D
Coordinates
chrLK031791:+:1043220..1044725
Molecular Weight (calculated)
45073.1 Da
IEP (calculated)
8.382
GRAVY (calculated)
-0.319
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGYYSCKK TDDICEDVCG QDGSRAAKAF SRVRCVLRGL DFKTYIIFLT IIPIFILGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHH NASMETLCSL
101: HGWTHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYVTQFV VLESNSTFTG LPKPLVFAAN RDKFDFVEPR LTYGNIGGRF KRGENPFVEE AYQRIALDQL
201: IGLAGIQEDD LLIMSDVDEI PSAHTINLLR WCDGYPPVLH LQLKNYLYSF EYYLDNKSWR ASVHRYKPGK TRYAHFRRGD TLLADAGWHC SFCFRRISEF
301: VFKMKAYSHN DRVRFSHYLN PKRIQDVVCR GTDLFDMLPE EHTFREIIGK LGPIPRSYSA VHLPGHLIEK AESYKYLLPG NCVRDSG
101: HGWTHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYVTQFV VLESNSTFTG LPKPLVFAAN RDKFDFVEPR LTYGNIGGRF KRGENPFVEE AYQRIALDQL
201: IGLAGIQEDD LLIMSDVDEI PSAHTINLLR WCDGYPPVLH LQLKNYLYSF EYYLDNKSWR ASVHRYKPGK TRYAHFRRGD TLLADAGWHC SFCFRRISEF
301: VFKMKAYSHN DRVRFSHYLN PKRIQDVVCR GTDLFDMLPE EHTFREIIGK LGPIPRSYSA VHLPGHLIEK AESYKYLLPG NCVRDSG
001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
Arabidopsis Description
At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.