Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68430 | Canola | cytosol, golgi, peroxisome | 96.39 | 96.39 |
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 89.69 | 89.69 |
| CDX69577 | Canola | cytosol | 88.92 | 89.15 |
| CDY09858 | Canola | cytosol | 88.92 | 89.15 |
| CDX70567 | Canola | cytosol | 88.66 | 88.89 |
| AT5G14480.1 | Thale cress | cytosol | 86.86 | 87.08 |
| CDY13721 | Canola | cytosol | 79.12 | 78.92 |
| CDX83706 | Canola | cytosol, golgi, plasma membrane | 78.87 | 78.66 |
| CDY49064 | Canola | golgi, plasma membrane, plastid | 77.06 | 77.86 |
| CDY37511 | Canola | golgi | 76.03 | 77.23 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 75.52 | 75.71 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 22.68 | 75.21 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 74.74 | 75.13 |
| PGSC0003DMT400040682 | Potato | cytosol | 72.68 | 72.68 |
| Solyc12g035470.1.1 | Tomato | cytosol | 72.16 | 72.16 |
| PGSC0003DMT400032896 | Potato | cytosol, golgi, plasma membrane | 71.91 | 71.91 |
| CDY34597 | Canola | cytosol | 72.42 | 71.68 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 71.65 | 71.65 |
| CDY21077 | Canola | cytosol | 72.16 | 71.43 |
| CDY28838 | Canola | golgi | 71.91 | 71.17 |
| CDY56530 | Canola | golgi | 71.39 | 70.66 |
| CDY19406 | Canola | cytosol | 71.39 | 70.66 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 75.0 | 70.46 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 70.1 | 70.1 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 69.85 | 69.67 |
| CDX98021 | Canola | cytosol | 70.36 | 69.47 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 68.3 | 68.3 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 68.04 | 67.87 |
| Os02t0595100-01 | Rice | golgi | 63.92 | 67.03 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 67.01 | 66.67 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 66.75 | 66.41 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 66.49 | 66.15 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 65.98 | 65.98 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 66.24 | 65.9 |
| GSMUA_Achr11P... | Banana | cytosol | 65.72 | 65.89 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 65.46 | 65.46 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 65.46 | 65.46 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 65.21 | 65.21 |
| Zm00001d050961_P001 | Maize | plasma membrane | 64.95 | 64.95 |
| Zm00001d003292_P001 | Maize | plasma membrane | 64.95 | 64.95 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 65.21 | 64.71 |
| Zm00001d017085_P002 | Maize | golgi | 64.69 | 64.69 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 63.92 | 63.92 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 63.92 | 63.92 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 63.66 | 63.66 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 63.66 | 57.85 |
| CDX81440 | Canola | golgi | 49.48 | 53.33 |
| CDX81441 | Canola | golgi | 48.97 | 52.34 |
| CDY37205 | Canola | golgi | 48.97 | 52.34 |
Protein Annotations
| KEGG:00500+2.4.1.14 | KEGG:00510+2.4.1.144 | MapMan:35.2 | GO:A0A078DP68 | EnsemblPlants:CDX91060 | ProteinID:CDX91060 |
| ProteinID:CDX91060.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00151832001 | InterPro:Glyco_trans_17 | PFAM:PF04724 |
| PANTHER:PTHR12224 | PANTHER:PTHR12224:SF1 | MetaCyc:PWY-7238 | MetaCyc:PWY-7347 | MetaCyc:PWY-7426 | TMHMM:TMhelix |
| UniPathway:UPA00378 | UniParc:UPI0004EB3389 | : | : | : | : |
Description
BnaC02g05370D
Coordinates
chrLK031865:-:588673..590207
Molecular Weight (calculated)
45156.2 Da
IEP (calculated)
8.574
GRAVY (calculated)
-0.283
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGHYYSSK KTDDICEDVC GQDGSRAAKA LSRVRCLLRG LDFKTYILFF TLVPLLIFGA YLHGQKLTYF LRPLWQSPPK PFQTIPHYHH VNVSMQTLCA
101: LHGWSHRDSP RRVFDAVLFS NEVDMLTIRW KELHPYVTQF VILESNSTFT GLPKPLVFAA NRENFGFVEP RLTYGSIGGR FRRGENPFVE EAYQRIALDQ
201: LIRLAGIQED DLLIMSDVDE IPSSHTINLL RWCDGYPPVL HLQLKNYLYS FEYYVDSKSW RGSVHRYIPG KTRYAHFRQG DVLLADSGWH CSFCFRRISE
301: FVFKMKAYSH NDRVRFSHYL NPKRIQDVIC RGTDLFDMIP EEYTFREIIG KLGPIPRSYS AVHLPSYLIE KAESYKYLLP GNCVRESG
101: LHGWSHRDSP RRVFDAVLFS NEVDMLTIRW KELHPYVTQF VILESNSTFT GLPKPLVFAA NRENFGFVEP RLTYGSIGGR FRRGENPFVE EAYQRIALDQ
201: LIRLAGIQED DLLIMSDVDE IPSSHTINLL RWCDGYPPVL HLQLKNYLYS FEYYVDSKSW RGSVHRYIPG KTRYAHFRQG DVLLADSGWH CSFCFRRISE
301: FVFKMKAYSH NDRVRFSHYL NPKRIQDVIC RGTDLFDMIP EEYTFREIIG KLGPIPRSYS AVHLPSYLIE KAESYKYLLP GNCVRESG
001: MSDGYINSKK TDDICEDVCG QGSKAAKTIS RLKCVLKGFD LRTYLFLFVL MPFGILAIYL HGQKFTYFFR PLWESPPKPF QTIPHYYNEN VTMESLCSLH
101: GWGIRDSPRR VFDAVLFSNE KDLLTVRWNE LYPYVTQFVI LESNSTFTGL PKPLVFKSNK DQFKFVEPRL TYGTIGGRFR KGENPFVEEA YQRVALDQLL
201: RIAGIQEDDL LIMSDVDEIP SAHTINLLRW CDDIPPVLHL QLKNYLYSFE YYVDSKSWRA SIHRYSPGKT RYAHFRQSNV MLADSGWHCS FCFRYISEFI
301: FKMKAYSHSD RVRFSHYLNP RRIQDVICKG TDLFDMLPEE YTFKEIIGKM GPVPRSYSAV HLPSYLLYNA EQYKYLLPGN CIREKQTGFI
101: GWGIRDSPRR VFDAVLFSNE KDLLTVRWNE LYPYVTQFVI LESNSTFTGL PKPLVFKSNK DQFKFVEPRL TYGTIGGRFR KGENPFVEEA YQRVALDQLL
201: RIAGIQEDDL LIMSDVDEIP SAHTINLLRW CDDIPPVLHL QLKNYLYSFE YYVDSKSWRA SIHRYSPGKT RYAHFRQSNV MLADSGWHCS FCFRYISEFI
301: FKMKAYSHSD RVRFSHYLNP RRIQDVICKG TDLFDMLPEE YTFKEIIGKM GPVPRSYSAV HLPSYLLYNA EQYKYLLPGN CIREKQTGFI
Arabidopsis Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT58]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.