Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69577 | Canola | cytosol | 91.99 | 91.99 |
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 91.73 | 91.49 |
| Bra006256.1-P | Field mustard | cytosol | 91.47 | 91.24 |
| Bra008753.1-P | Field mustard | cytosol | 91.21 | 91.21 |
| CDY09858 | Canola | cytosol | 90.96 | 90.96 |
| CDX70567 | Canola | cytosol | 90.18 | 90.18 |
| CDY68430 | Canola | cytosol, golgi, peroxisome | 87.6 | 87.37 |
| Bra023467.1-P | Field mustard | cytosol, golgi, peroxisome | 87.6 | 87.37 |
| CDX91060 | Canola | cytosol, golgi, plasma membrane | 87.08 | 86.86 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 81.65 | 81.44 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 79.84 | 79.23 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 78.81 | 78.81 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 74.94 | 75.13 |
| PGSC0003DMT400040682 | Potato | cytosol | 74.42 | 74.23 |
| Solyc12g035470.1.1 | Tomato | cytosol | 73.9 | 73.71 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 77.52 | 72.64 |
| PGSC0003DMT400032896 | Potato | cytosol, golgi, plasma membrane | 72.61 | 72.42 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 72.35 | 72.16 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 21.71 | 71.79 |
| AT1G12990.1 | Thale cress | cytosol | 72.35 | 71.43 |
| AT1G67880.1 | Thale cress | golgi | 71.32 | 70.77 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 70.28 | 69.92 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 69.51 | 69.33 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 68.73 | 68.56 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 68.99 | 68.46 |
| Os02t0595100-01 | Rice | golgi | 65.37 | 68.38 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 68.73 | 68.21 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 68.73 | 68.21 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 68.22 | 67.69 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 67.7 | 67.35 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 67.44 | 67.27 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 67.18 | 67.01 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 66.67 | 66.49 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 66.93 | 66.24 |
| Zm00001d003292_P001 | Maize | plasma membrane | 66.41 | 66.24 |
| Zm00001d050961_P001 | Maize | plasma membrane | 66.15 | 65.98 |
| GSMUA_Achr11P... | Banana | cytosol | 65.63 | 65.63 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 65.63 | 65.46 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 65.37 | 65.21 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 65.37 | 65.21 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 65.12 | 64.95 |
| Zm00001d017085_P002 | Maize | golgi | 65.12 | 64.95 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 64.6 | 58.55 |
| AT3G26445.1 | Thale cress | extracellular, golgi | 16.02 | 52.54 |
| AT2G13290.1 | Thale cress | golgi | 48.84 | 52.35 |
Protein Annotations
| KEGG:00510+2.4.1.144 | MapMan:35.2 | EntrezGene:831299 | UniProt:A0A178UKL0 | ProteinID:AED92039.1 | ArrayExpress:AT5G14480 |
| EnsemblPlantsGene:AT5G14480 | RefSeq:AT5G14480 | TAIR:AT5G14480 | RefSeq:AT5G14480-TAIR-G | EnsemblPlants:AT5G14480.1 | TAIR:AT5G14480.1 |
| Unigene:At.31927 | EMBL:BT015874 | EMBL:BT020186 | ProteinID:CAB87787.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003830 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_17 | EMBL:KJ138694 | RefSeq:NP_196952.1 | ProteinID:OAO93634.1 |
| PFAM:PF04724 | PO:PO:0000293 | PANTHER:PTHR12224 | PANTHER:PTHR12224:SF1 | UniProt:Q9LY81 | TMHMM:TMhelix |
| UniParc:UPI0000048B30 | SEG:seg | : | : | : | : |
Description
At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
Coordinates
chr5:+:4667774..4670213
Molecular Weight (calculated)
45203.2 Da
IEP (calculated)
8.437
GRAVY (calculated)
-0.320
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.