CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006256.1-P	Field mustard	cytosol	98.97	98.97
CDX70567	Canola	cytosol	97.42	97.67
CDX69577	Canola	cytosol	92.01	92.25
AT5G14480.1	Thale cress	cytosol	91.49	91.73
CDY09858	Canola	cytosol	91.24	91.47
CDY68430	Canola	cytosol, golgi, peroxisome	89.95	89.95
CDX91060	Canola	cytosol, golgi, plasma membrane	89.69	89.69
CDY49064	Canola	golgi, plasma membrane, plastid	76.8	77.6
CDY37511	Canola	golgi	75.52	76.7
CDY13721	Canola	cytosol	76.55	76.35
KRG94031	Soybean	cytosol, golgi, plasma membrane	75.52	75.71
CDX83706	Canola	cytosol, golgi, plasma membrane	75.77	75.58
KRG93199	Soybean	cytosol, golgi, plasma membrane	74.23	74.61
PGSC0003DMT400040682	Potato	cytosol	71.91	71.91
HORVU2Hr1G082670.1	Barley	cytosol	21.65	71.79
Solyc12g035470.1.1	Tomato	cytosol	71.65	71.65
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	76.03	71.43
CDY34597	Canola	cytosol	71.91	71.17
CDY28838	Canola	golgi	71.65	70.92
CDY21077	Canola	cytosol	71.65	70.92
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	70.88	70.88
CDY56530	Canola	golgi	71.39	70.66
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	70.62	70.62
CDY19406	Canola	cytosol	70.62	69.9
CDX98021	Canola	cytosol	69.85	68.96
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	67.78	67.61
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	67.53	67.53
Os02t0595100-01	Rice	golgi	64.18	67.3
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	67.27	66.92
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	67.01	66.67
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	66.49	66.32
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	66.24	66.24
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	66.49	66.15
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	66.49	66.15
EES12371	Sorghum	cytosol, golgi, plasma membrane	65.72	65.72
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	65.46	65.46
KXG30544	Sorghum	cytosol, golgi, plasma membrane	64.95	64.95
Zm00001d050961_P001	Maize	plasma membrane	64.95	64.95
Zm00001d003292_P001	Maize	plasma membrane	64.95	64.95
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	65.21	64.71
Zm00001d017085_P002	Maize	golgi	64.69	64.69
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	64.69	64.69
GSMUA_Achr11P...	Banana	cytosol	64.43	64.6
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	63.66	63.66
TraesCS2D01G336600.1	Wheat	cytosol	63.66	63.66
TraesCS2B01G355800.1	Wheat	cytosol	63.4	63.4
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	63.14	57.38
CDX81440	Canola	golgi	47.94	51.67
CDX81441	Canola	golgi	47.68	50.96
CDY37205	Canola	golgi	47.68	50.96

Protein Annotations

KEGG:00500+2.4.1.14	KEGG:00510+2.4.1.144	MapMan:35.2	GO:A0A078CRA3	EnsemblPlants:CDX78579	ProteinID:CDX78579
ProteinID:CDX78579.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975
GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00129989001	InterPro:Glyco_trans_17	PFAM:PF04724
PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	MetaCyc:PWY-7238	MetaCyc:PWY-7347	MetaCyc:PWY-7426	TMHMM:TMhelix
UniPathway:UPA00378	UniParc:UPI0004EE0F2B	:	:	:	:

Description

BnaA03g04910D

Coordinates

chrLK031815:+:1376378..1377810

Molecular Weight (calculated)

45144.2 Da

IEP (calculated)

8.251

GRAVY (calculated)

-0.301

Length

388 amino acids

Sequence
(BLAST)

001: MSDGYYSCKK TDDICEDVCG QDGSRAAKAF SRVRCVLRGL DFKTYIIFLT IVPIFILGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHH NASMETLCSL
101: HGWSHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYVTQFV ILESNSTFTG LPKPLVFAAN REKNFEFVEP RLTYGNIGGR FKRGENPFVE EAYQRIALDQ
201: LIGLAGIQED DLLIMSDVDE IPSAHTINLL RWCDGYPPVL HLQLKNYLYS FEYFVDNKSW RASVHLYKPG KTRYAHFRRG DTLLADSGWH CSFCFRRISE
301: FVFKMKAYSH NDRVRFSHYL NPKRIQDVVC RGTDLFDMLP EEHTFREIIG KLGPIPRSYS AVHLPGHLIE KAESYKYLLP GNCVRDSG

Best Arabidopsis Sequence Match ( AT5G14480.1 )
(BLAST)

001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG

Arabidopsis Description

At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.