CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81441	Canola	golgi	100.0	100.0
Bra037205.1-P	Field mustard	golgi	99.45	99.45
CDX81440	Canola	golgi	93.94	94.72
AT2G13290.1	Thale cress	golgi	85.12	85.6
VIT_11s0016g05630.t01	Wine grape	mitochondrion	68.32	68.32
PGSC0003DMT400079376	Potato	golgi, mitochondrion	68.04	66.22
Solyc07g008030.1.1	Tomato	mitochondrion	67.77	65.95
KRH20138	Soybean	golgi, mitochondrion	65.56	64.32
KRH03667	Soybean	golgi, mitochondrion	65.29	64.05
GSMUA_Achr4P31720_001	Banana	mitochondrion	61.71	61.71
GSMUA_Achr7P01000_001	Banana	golgi	60.88	61.22
Zm00001d041299_P001	Maize	golgi, mitochondrion	59.5	59.34
OQU79586	Sorghum	mitochondrion	59.23	59.07
Os12t0611900-01	Rice	golgi, mitochondrion	58.68	58.52
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	57.58	57.1
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	57.58	57.1
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	57.85	56.45
HORVU5Hr1G011270.1	Barley	golgi, plastid	57.58	56.18
TraesCS6B01G103200.1	Wheat	golgi	58.13	55.53
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	58.68	55.47
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	58.13	55.38
TraesCSU01G026400.1	Wheat	golgi	57.58	55.29
CDX98021	Canola	cytosol	55.1	50.89
CDY56530	Canola	golgi	54.55	50.51
CDY19406	Canola	cytosol	54.55	50.51
CDY34597	Canola	cytosol	54.55	50.51
CDY28838	Canola	golgi	54.55	50.51
CDX83706	Canola	cytosol, golgi, plasma membrane	53.99	50.39
CDY21077	Canola	cytosol	54.27	50.26
CDY13721	Canola	cytosol	53.17	49.61
TraesCS6A01G077400.1	Wheat	mitochondrion	49.86	49.32
CDY09858	Canola	cytosol	52.34	49.1
CDX91060	Canola	cytosol, golgi, plasma membrane	52.34	48.97
CDY68430	Canola	cytosol, golgi, peroxisome	52.34	48.97
CDX69577	Canola	cytosol	52.07	48.84
CDY49064	Canola	golgi, plasma membrane, plastid	51.24	48.44
CDY37511	Canola	golgi	50.96	48.43
CDX78579	Canola	cytosol, golgi, plasma membrane	50.96	47.68
CDX70567	Canola	cytosol	50.69	47.55

Protein Annotations

KEGG:00500+2.4.1.14	KEGG:00510+2.4.1.144	MapMan:35.2	GO:A0A078CWB7	UniProt:A0A078CWB7	EnsemblPlants:CDY37205
ProteinID:CDY37205	ProteinID:CDY37205.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00063686001	InterPro:Glyco_trans_17
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	MetaCyc:PWY-7238
MetaCyc:PWY-7347	MetaCyc:PWY-7426	SUPFAM:SSF53448	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EF27C5
SEG:seg	:	:	:	:	:

Description

BnaA09g08260DBnaA09g08260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078CWB7]

Coordinates

chrLK032395:-:55927..57635

Molecular Weight (calculated)

42422.3 Da

IEP (calculated)

8.633

GRAVY (calculated)

-0.272

Length

363 amino acids

Sequence
(BLAST)

001: MKIRSLRQPP PKLVLLPTLV IIVSSTCLFG ILTNLQTLSY LLRPLWDKPP PPFRRIPHYY AENVSMAHLC NLHGWTPRTE PRRVFDAIIF SNELDLLELR
101: WQELGPYVSK FVILESNTTF TGIPKPLFFD SNKERFAFAE GKIVHGVFPG KKRLHHDQQQ EDPFLLEGQQ RVAMNWLLRE ANVSDGDAVI MSDADEIPSP
201: HTVKFLQWCD GIPDVMHLEM RDYMYSFEFP VDYSSWRASV HIYSRKWTHY RHSRQTDLIL SDAGWHCSFC FRRLSEFVFK MKGYSHADRV KRKEFLDYSR
301: IQKHICKGYD LFDMLPEEYS FKDLISKIGP IPPSTSAVHL PAFLIQNAAR FRFLLPGGCL REP

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.