Factsheet for TraesCS6B01G103200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	90.0	89.76
TraesCSU01G026400.1	Wheat	golgi	87.63	88.1
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	88.42	87.5
TraesCS6A01G077400.1	Wheat	mitochondrion	81.84	84.74
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	69.47	70.97
GSMUA_Achr7P01000_001	Banana	golgi	61.58	64.82
GSMUA_Achr4P31720_001	Banana	mitochondrion	59.74	62.53
KRH03667	Soybean	golgi, mitochondrion	57.63	59.19
KRH20138	Soybean	golgi, mitochondrion	56.84	58.38
CDX81440	Canola	golgi	55.26	58.33
Bra037205.1-P	Field mustard	golgi	55.53	58.13
CDY37205	Canola	golgi	55.53	58.13
CDX81441	Canola	golgi	55.53	58.13
AT2G13290.1	Thale cress	golgi	54.74	57.62
VIT_11s0016g05630.t01	Wine grape	mitochondrion	55.0	57.58
Solyc07g008030.1.1	Tomato	mitochondrion	54.21	55.23
PGSC0003DMT400079376	Potato	golgi, mitochondrion	53.42	54.42
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	47.89	46.67
TraesCS2B01G355800.1	Wheat	cytosol	47.11	46.13

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	PFAM:PF04724
PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G103200	EnsemblPlants:TraesCS6B01G103200.1	SEG:seg

Description

No Description!

Coordinates

chr6B:+:81025697..81026839

Molecular Weight (calculated)

43272.5 Da

IEP (calculated)

9.784

GRAVY (calculated)

-0.102

Length

380 amino acids

Sequence
(BLAST)

001: MAGSSDYRPF NLAARVVGKR RRLILPAKLK SAIPAIALVL SAVAIIAAIT QHHRSITYFL RPLWDTPPKP FTVIPHYYAP NTSMAELCAL HGWRARASPR
101: RVFDAVLFNN ELDILEIRYR ELLPYVHKLL ILEANATFTG IPKPLSFAEN LERFAFARSK IVYDRLAIAT PGPRSHLREE PFDVEARHRR ALNALLRRSG
201: VAAGDVVIMA DADEIPSPET VQLLRWCDGV PPVMHLQLEN YVYSFEFPVD QGSWRATAHL FGERTAYQHS RQSDLILADA GWHCSFCFRE VAEFVFKMKA
301: YSHADRVRRQ SFLDPARIQR VVCGGEDLFD MLPEEYTFRD LFKKMGPIPR SASAMHLPSY LIKNAHRFRF LLPGGCLRSG

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.