Factsheet for Solyc07g008030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079376	Potato	golgi, mitochondrion	94.91	94.91
VIT_11s0016g05630.t01	Wine grape	mitochondrion	72.12	74.1
CDX81440	Canola	golgi	66.76	69.17
KRH20138	Soybean	golgi, mitochondrion	68.1	68.65
KRH03667	Soybean	golgi, mitochondrion	67.83	68.38
AT2G13290.1	Thale cress	golgi	65.95	68.14
CDX81441	Canola	golgi	65.95	67.77
CDY37205	Canola	golgi	65.95	67.77
Bra037205.1-P	Field mustard	golgi	65.42	67.22
GSMUA_Achr4P31720_001	Banana	mitochondrion	62.73	64.46
GSMUA_Achr7P01000_001	Banana	golgi	60.32	62.33
OQU79586	Sorghum	mitochondrion	54.69	56.04
Zm00001d041299_P001	Maize	golgi, mitochondrion	54.42	55.77
Os12t0611900-01	Rice	golgi, mitochondrion	53.62	54.95
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	53.89	54.92
TraesCSU01G026400.1	Wheat	golgi	55.5	54.76
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	56.03	54.43
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	53.35	54.37
TraesCS6B01G103200.1	Wheat	golgi	55.23	54.21
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	54.96	53.81
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	53.35	53.49
HORVU5Hr1G011270.1	Barley	golgi, plastid	53.35	53.49
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	53.08	51.03
Solyc12g035470.1.1	Tomato	cytosol	51.47	49.48
Solyc05g013580.2.1	Tomato	cytosol	44.77	48.83
TraesCS6A01G077400.1	Wheat	mitochondrion	47.45	48.23

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17
UniProt:K4CBS2	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	EnsemblPlantsGene:Solyc07g008030.1	EnsemblPlants:Solyc07g008030.1.1
TMHMM:TMhelix	UniParc:UPI000276B00E	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:2741163..2742284

Molecular Weight (calculated)

44094.6 Da

IEP (calculated)

9.203

GRAVY (calculated)

-0.245

Length

373 amino acids

Sequence
(BLAST)

001: MLGKLLPWSR MAPRHSRLIS RRSHGKVIFI VLLILVPILL FGIYVHFHKI SYFFRPLWDK PPPPFKHLPH YYAENVSMDN LCRLHGWTLR PEPRRVFDGI
101: IFSNELDLLE IRWRELYPYV MKFVILEANT TFTGLPKPLY FSDHRERFAF AEDKIVHGVF PGRIASPELH EDPFKLEGQQ RIAMNRLLHA AGIFEDDLLI
201: MSDTDEIPSH HTIKLLQWCD GMPPVMHLEL RHYLYSFEFP VDYSSWRASV HIYNRWTKYR HSRQSDIILS DAGWHCSFCF RNLQDFVVKM TGYSHADRVR
301: RTNFLKYSRI QKLICEGDDL YDMLPEEYSF HELIKKMGSI PRSASAVHLP THIIENAGKF RFLLPGGCQR SPR

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.