CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20138	Soybean	golgi, mitochondrion	92.43	92.43
VIT_11s0016g05630.t01	Wine grape	mitochondrion	76.76	78.24
PGSC0003DMT400079376	Potato	golgi, mitochondrion	68.65	68.1
Solyc07g008030.1.1	Tomato	mitochondrion	68.38	67.83
CDX81440	Canola	golgi	64.86	66.67
GSMUA_Achr4P31720_001	Banana	mitochondrion	65.41	66.67
AT2G13290.1	Thale cress	golgi	64.86	66.48
GSMUA_Achr7P01000_001	Banana	golgi	64.32	65.93
Bra037205.1-P	Field mustard	golgi	64.05	65.29
CDX81441	Canola	golgi	64.05	65.29
CDY37205	Canola	golgi	64.05	65.29
OQU79586	Sorghum	mitochondrion	60.54	61.54
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	60.54	61.2
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	60.54	61.2
Zm00001d041299_P001	Maize	golgi, mitochondrion	59.46	60.44
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	60.54	60.22
Os12t0611900-01	Rice	golgi, mitochondrion	59.19	60.16
HORVU5Hr1G011270.1	Barley	golgi, plastid	60.0	59.68
TraesCSU01G026400.1	Wheat	golgi	59.46	58.2
TraesCS6B01G103200.1	Wheat	golgi	59.19	57.63
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	59.73	57.55
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	58.38	56.69
KRG97530	Soybean	cytosol	56.22	53.06
KRG93199	Soybean	cytosol, golgi, plasma membrane	55.14	52.85
KRH31342	Soybean	cytosol	55.95	52.81
KRH59271	Soybean	cytosol	55.41	52.43
KRH43122	Soybean	cytosol	55.14	52.17
TraesCS6A01G077400.1	Wheat	mitochondrion	51.08	51.5
KRG94031	Soybean	cytosol, golgi, plasma membrane	53.78	51.42

Protein Annotations

KEGG:00510+2.4.1.144	EntrezGene:100804627	MapMan:35.2	EMBL:ACUP02010356	EnsemblPlantsGene:GLYMA_17G112400	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:K7ML44	EnsemblPlants:KRH03667	ProteinID:KRH03667
ProteinID:KRH03667.1	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	MetaCyc:PWY-7238	MetaCyc:PWY-7347
MetaCyc:PWY-7426	TMHMM:TMhelix	UniParc:UPI000233E0B5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:8864215..8866962

Molecular Weight (calculated)

43065.3 Da

IEP (calculated)

8.880

GRAVY (calculated)

-0.163

Length

370 amino acids

Sequence
(BLAST)

001: MFPLQVQRLA PRPRHISRQK PPIFFCALLL LLLPICVVGI FIHGQKITYF FRPLWDNPPA PFTSIPHYYA ENVSMEHLCR LHGWSLRSKP RRIFDAVIFS
101: NELDMLEIRW HELSPYVSKF VILESNTTFT GIPKRLFFAL NRERFSFAKQ KIVHDIYPGR IAVPGSHEDP FVLESKQRGA MNALLRRAGI SNGDILLMSD
201: TDEIPSPHTL KLLQWCDGIP PIMHLELRNY MYSFEFPVDY SSWRATAHVY GPRSQYRHSR QTDVIFSDAG WHCSFCFQYI SEFVFKMTAY SHADRVKRKY
301: FLSHSRIQDI ICKGDDLCDM LPEEYSFQEL IKKMGSIPRS ASAVHLPAYL IENADKFKFL LPGGCLRPPE

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.