CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 3
golgi 1
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93199	Soybean	cytosol, golgi, plasma membrane	84.24	84.46
AT5G14480.1	Thale cress	cytosol	78.81	78.81
KRG97530	Soybean	cytosol	78.81	77.81
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	82.95	77.72
KRH31342	Soybean	cytosol	78.55	77.55
AT3G27540.1	Thale cress	cytosol, golgi, plasma membrane	78.04	77.44
CDY09858	Canola	cytosol	77.0	77.0
Solyc12g035470.1.1	Tomato	cytosol	76.74	76.55
CDX69577	Canola	cytosol	76.49	76.49
PGSC0003DMT400040682	Potato	cytosol	76.49	76.29
CDX70567	Canola	cytosol	76.23	76.23
Bra008753.1-P	Field mustard	cytosol	75.97	75.97
Bra025284.1-P	Field mustard	cytosol	75.97	75.58
Bra006256.1-P	Field mustard	cytosol	75.71	75.52
CDY68430	Canola	cytosol, golgi, peroxisome	75.71	75.52
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	75.71	75.52
CDX91060	Canola	cytosol, golgi, plasma membrane	75.71	75.52
CDX78579	Canola	cytosol, golgi, plasma membrane	75.71	75.52
CDY13721	Canola	cytosol	75.71	75.32
CDX83706	Canola	cytosol, golgi, plasma membrane	75.71	75.32
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	75.45	75.26
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	75.19	75.0
Bra039107.1-P	Field mustard	cytosol	57.36	74.5
HORVU2Hr1G082670.1	Barley	cytosol	22.48	74.36
KRH59271	Soybean	cytosol	74.94	74.17
KRH43122	Soybean	cytosol	74.94	74.17
AT3G01620.1	Thale cress	cytosol, golgi, plasma membrane	73.39	73.2
CDY49064	Canola	golgi, plasma membrane, plastid	70.28	70.83
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	71.06	70.69
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	70.8	70.62
CDY37511	Canola	golgi	69.25	70.16
EES12371	Sorghum	cytosol, golgi, plasma membrane	69.25	69.07
Zm00001d003292_P001	Maize	plasma membrane	69.25	69.07
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	69.51	68.97
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	69.51	68.97
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	69.25	68.72
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	68.73	68.56
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	68.73	68.56
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	68.99	68.46
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	68.73	68.38
GSMUA_Achr11P...	Banana	cytosol	68.22	68.22
Os02t0595100-01	Rice	golgi	65.12	68.11
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	68.22	68.04
KXG30544	Sorghum	cytosol, golgi, plasma membrane	67.7	67.53
Zm00001d050961_P001	Maize	plasma membrane	67.18	67.01
TraesCS2D01G336600.1	Wheat	cytosol	67.18	67.01
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	67.18	67.01
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	67.7	67.01
TraesCS2B01G355800.1	Wheat	cytosol	66.93	66.75
Zm00001d017085_P002	Maize	golgi	66.67	66.49
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	67.18	60.89
KRH03667	Soybean	golgi, mitochondrion	51.42	53.78
KRH20138	Soybean	golgi, mitochondrion	51.16	53.51

Protein Annotations

KEGG:00510+2.4.1.144	EntrezGene:100778832	MapMan:35.2	EMBL:ACUP02011672	EnsemblPlantsGene:GLYMA_19G056500	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:I1N6Z4	EnsemblPlants:KRG94031	ProteinID:KRG94031
ProteinID:KRG94031.1	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	MetaCyc:PWY-7238	MetaCyc:PWY-7347
MetaCyc:PWY-7426	TMHMM:TMhelix	UniParc:UPI000233EFF5	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:10193428..10196404

Molecular Weight (calculated)

45322.6 Da

IEP (calculated)

7.981

GRAVY (calculated)

-0.250

Length

387 amino acids

Sequence
(BLAST)

001: MSEGYYNSKK TDDICDDVCG QNGTPAALSM SRLKCILKGL DFKTYIFLFV IVPVGIFGLY LHGQKISYFL RPLWESPPKP FHEIPHYYHE NVSMESLCKL
101: HGWGIRESPR RVFDAVLFSN EVDILTIRWK EMQPYVTQYV LLESNSTFTG FVKPLLFSGN RDKFKFLESR LTYGVIGGRF KKKENPFIEE AYQRVALDQL
201: LRIAGIEDDD LLIMSDVDEI PSAHTINLLR WCDGIPPVLH LQLKNYLYSF EFFLDNKSWR ASIHRYQTGK TWYAHYRQAD VLLADAGWHC SFCFRHINEF
301: IFKMKAYSHY DRVRFPHYLN PDRIQDVICK GADLFDMLPE EYTFKEIIGK LGPIPHSYSA VHLPAYLLNN AERFRFLLPG NCRRERG

Best Arabidopsis Sequence Match ( AT5G14480.1 )
(BLAST)

001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG

Arabidopsis Description

At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.