Factsheet for Bra025284.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13721	Canola	cytosol	99.74	99.74
AT3G27540.1	Thale cress	cytosol, golgi, plasma membrane	88.95	88.72
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	77.64	77.84
Bra039107.1-P	Field mustard	cytosol	58.61	76.51
Bra008753.1-P	Field mustard	cytosol	76.09	76.49
Bra006256.1-P	Field mustard	cytosol	76.09	76.29
KRG94031	Soybean	cytosol, golgi, plasma membrane	75.58	75.97
Bra004065.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	65.81	75.96
KRG93199	Soybean	cytosol, golgi, plasma membrane	72.49	73.06
PGSC0003DMT400040682	Potato	cytosol	72.75	72.94
Solyc12g035470.1.1	Tomato	cytosol	72.24	72.42
Bra016746.1-P	Field mustard	cytosol	72.75	72.19
PGSC0003DMT400032896	Potato	cytosol, golgi, plasma membrane	71.47	71.65
Bra019802.1-P	Field mustard	cytosol	71.72	71.54
Solyc02g093430.2.1	Tomato	cytosol, golgi, plasma membrane	71.21	71.39
HORVU2Hr1G082670.1	Barley	cytosol	21.34	70.94
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	68.89	68.89
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	73.01	68.77
Os02t0595100-01	Rice	golgi	64.78	68.11
EES12371	Sorghum	cytosol, golgi, plasma membrane	67.87	68.04
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	67.61	67.78
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	67.87	67.69
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	67.35	67.53
GSMUA_Achr11P...	Banana	cytosol	67.1	67.44
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	67.61	67.44
Zm00001d003292_P001	Maize	plasma membrane	67.1	67.27
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	67.1	67.27
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	67.35	67.18
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	66.84	66.67
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	66.32	66.49
KXG30544	Sorghum	cytosol, golgi, plasma membrane	66.07	66.24
TraesCS2D01G336600.1	Wheat	cytosol	66.07	66.24
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	66.32	65.98
Zm00001d050961_P001	Maize	plasma membrane	65.81	65.98
TraesCS2B01G355800.1	Wheat	cytosol	65.81	65.98
Zm00001d017085_P002	Maize	golgi	65.55	65.72
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	65.3	65.3
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	64.52	64.69
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	66.32	60.42
Bra037205.1-P	Field mustard	golgi	49.36	52.89

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EnsemblPlantsGene:Bra025284	EnsemblPlants:Bra025284.1	EnsemblPlants:Bra025284.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:M4E928	PFAM:PF04724	PANTHER:PTHR12224
PANTHER:PTHR12224:SF1	TMHMM:TMhelix	UniParc:UPI000253F59A	:	:	:

Description

AT3G27540 (E=1e-213) | glycosyl transferase family 17 protein

Coordinates

chrA06:-:22395146..22396687

Molecular Weight (calculated)

45390.4 Da

IEP (calculated)

8.094

GRAVY (calculated)

-0.326

Length

389 amino acids

Sequence
(BLAST)

001: MSDGYYNSKK TDDICDDVCG QQGSKAGATI SRLKCVLRGF DVRTLLCLFI LVPFAIFAIY LHGQKLTYFF RPLWESPPKP FHTIPHYHTE NATMQSLCSL
101: HGWGVRDSPR RVYDAVLFSN EKDLLTVRWK ELYPYVTQFV LLESNSTFTG LPKPFVFKSN KEQFSFVEER LTYGNIGGRF RKGENPFVEE AFQRVALDKL
201: LRIAGIEEDD LLIMSDVDEI PSAHTINLLR WCDDIPPVLH LQLKNYLYSF EYYVDSKSWR ASIHRYNPGK TRYAHFRQSD VMLSDSGWHC SFCFRYINDF
301: VFKMKAYSHS DRVRFSHYLN PVRIQDVICK GTDLFDMLPE EYTFKEMIGK MGPVPRSYSA VHLPSYLLEN AEKYKYLLPG NCVRERQTG

Best Arabidopsis Sequence Match ( AT3G27540.1 )
(BLAST)

001: MSDGYINSKK TDDICEDVCG QGSKAAKTIS RLKCVLKGFD LRTYLFLFVL MPFGILAIYL HGQKFTYFFR PLWESPPKPF QTIPHYYNEN VTMESLCSLH
101: GWGIRDSPRR VFDAVLFSNE KDLLTVRWNE LYPYVTQFVI LESNSTFTGL PKPLVFKSNK DQFKFVEPRL TYGTIGGRFR KGENPFVEEA YQRVALDQLL
201: RIAGIQEDDL LIMSDVDEIP SAHTINLLRW CDDIPPVLHL QLKNYLYSFE YYVDSKSWRA SIHRYSPGKT RYAHFRQSNV MLADSGWHCS FCFRYISEFI
301: FKMKAYSHSD RVRFSHYLNP RRIQDVICKG TDLFDMLPEE YTFKEIIGKM GPVPRSYSAV HLPSYLLYNA EQYKYLLPGN CIREKQTGFI

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT58]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.