Factsheet for Bra004065.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

plastid 3
endoplasmic reticulum 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56530	Canola	golgi	99.7	85.71
CDY28838	Canola	golgi	98.22	84.44
AT1G67880.1	Thale cress	golgi	93.18	80.51
Bra016746.1-P	Field mustard	cytosol	85.46	73.47
Bra019802.1-P	Field mustard	cytosol	84.87	73.33
Bra039107.1-P	Field mustard	cytosol	64.69	73.15
KRH59271	Soybean	cytosol	81.01	69.82
KRH43122	Soybean	cytosol	81.01	69.82
KRG97530	Soybean	cytosol	80.42	69.13
KRH31342	Soybean	cytosol	80.12	68.88
PGSC0003DMT400047881	Potato	cytosol	80.12	68.01
PGSC0003DMT400011491	Potato	cytosol	80.12	68.01
HORVU2Hr1G082670.1	Barley	cytosol	23.15	66.67
Bra023467.1-P	Field mustard	cytosol, golgi, peroxisome	76.26	66.24
Bra006256.1-P	Field mustard	cytosol	75.96	65.98
Bra008753.1-P	Field mustard	cytosol	75.67	65.89
Bra025284.1-P	Field mustard	cytosol	75.96	65.81
Solyc05g013580.2.1	Tomato	cytosol	63.5	62.57
GSMUA_Achr11P...	Banana	cytosol	71.51	62.27
Os02t0595100-01	Rice	golgi	67.36	61.35
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	69.44	60.0
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	69.14	59.9
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	69.14	59.74
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	69.14	59.74
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	69.14	59.74
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	68.55	59.38
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	68.25	59.28
KXG30544	Sorghum	cytosol, golgi, plasma membrane	67.95	59.02
EES12371	Sorghum	cytosol, golgi, plasma membrane	67.66	58.76
Zm00001d050961_P001	Maize	plasma membrane	67.36	58.51
Zm00001d017085_P002	Maize	golgi	67.36	58.51
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	67.36	58.51
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	67.36	58.51
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	67.06	58.25
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	67.06	57.8
Zm00001d003292_P001	Maize	plasma membrane	66.47	57.73
TraesCS2D01G336600.1	Wheat	cytosol	66.17	57.47
TraesCS2B01G355800.1	Wheat	cytosol	65.88	57.22
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	65.58	56.96
Bra037205.1-P	Field mustard	golgi	57.57	53.44
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	65.88	51.99
VIT_01s0137g00810.t01	Wine grape	cytosol	81.6	41.54

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EnsemblPlantsGene:Bra004065	EnsemblPlants:Bra004065.1	EnsemblPlants:Bra004065.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:M4CIN1	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF4
UniParc:UPI0002541325	:	:	:	:	:

Description

AT1G67880 (E=2e-193) | glycosyl transferase family 17 protein

Coordinates

chrA07:+:16636018..16637031

Molecular Weight (calculated)

39742.6 Da

IEP (calculated)

7.248

GRAVY (calculated)

-0.394

Length

337 amino acids

Sequence
(BLAST)

001: MCVIGVYIHG LKISYFLRPL WESPPKPFHD IPHYHHENAS MESLCKLHGW GVREYPRRVY DAVLFSTEVE LLTIRWQELY PYVTQFVLLE SNSTFTGLPK
101: PLVFASHRAD DEFKFVEPRL TYGSVGGRFK KGEKNPFYEE AYQRVALDQL LRLAGITDDD LLIMSDVDEI PSRHTINLLS WCDDIPEILH LRLKNYLYSF
201: EFPVDDKSWR ASVHRYKTGK TKYAHYRQSD EILADSGWHC SFCFRRISEF VFKMKAYSHY DRVRFGHYLN PKRVQRVICN GDDLFDMIPE EYTFKDIIGK
301: MGPIPHSYSA VHLPAYLLEN AERYKFLLPG NCLRDKE

Best Arabidopsis Sequence Match ( AT1G67880.1 )
(BLAST)

001: MWWMMGENGG HYCSKKSDDL CGTQESDRGF GISRLCCILR GVDLKSVLFL LVIMPMCVLG VYINALKISY FLRPLWESPP KPFHEIPHYH HENASMESLC
101: KLHGWRTREY PRRVYDAVLF STEVELLTIR WKELYPYVTQ FVLLESNSTF TGLPKPLVFA GHRDEFKFIE PRLTYGSIGG RFKKGEKNPF YEEAYQRIAL
201: DQLLRIAGIT DDDLLIMSDV DEIPSRHTIN LLRWCDDIPQ ILHLRLKNYL YSFEFPVDDK SWRASVHRYQ TGKTRYAHYR QSDVILADSG WHCSFCFRRI
301: SEFVFKMKAY SHYDRVRFAH YLNPKRVQRV ICSGSDLFDM IPEEYTFKDI IGKMGPIPHS YSAVHLPAYL LENAERYKFL LPGNCLRDEE

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9V4]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.