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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, secretory
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G209000.1 Wheat cytosol, golgi, plasma membrane 99.74 99.74
TraesCS6B01G238000.1 Wheat cytosol, golgi, plasma membrane 98.21 98.21
HORVU6Hr1G053550.2 Barley cytosol, golgi, plasma membrane 97.44 97.44
Os02t0595100-01 Rice golgi 86.67 91.35
Os02t0594900-01 Rice cytosol, golgi, plasma membrane 91.54 91.3
Zm00001d050961_P001 Maize plasma membrane 89.49 89.95
KXG30544 Sorghum cytosol, golgi, plasma membrane 89.49 89.95
Zm00001d017085_P002 Maize golgi 86.41 86.86
TraesCS2D01G336600.1 Wheat cytosol 78.97 79.38
GSMUA_Achr8P28540_001 Banana cytosol, golgi, plasma membrane 78.21 78.41
GSMUA_Achr10P... Banana cytosol, golgi, plasma membrane 77.95 78.35
GSMUA_Achr6P12150_001 Banana cytosol, golgi, plasma membrane 77.69 78.09
GSMUA_Achr9P07530_001 Banana cytosol, golgi, plasma membrane 77.44 77.64
GSMUA_Achr6P28040_001 Banana cytosol, golgi, plasma membrane 76.41 76.8
KRG97530 Soybean cytosol 71.28 70.92
KRH31342 Soybean cytosol 70.0 69.64
Bra004065.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion 60.0 69.44
KRG94031 Soybean cytosol, golgi, plasma membrane 68.72 69.25
PGSC0003DMT400047881 Potato cytosol 70.26 69.02
AT5G14480.1 Thale cress cytosol 68.46 68.99
Bra039107.1-P Field mustard cytosol 52.56 68.79
AT3G01620.1 Thale cress cytosol, golgi, plasma membrane 67.69 68.04
Bra025284.1-P Field mustard cytosol 67.69 67.87
CDY13721 Canola cytosol 67.69 67.87
CDX83706 Canola cytosol, golgi, plasma membrane 67.69 67.87
AT1G12990.1 Thale cress cytosol 68.21 67.86
PGSC0003DMT400032896 Potato cytosol, golgi, plasma membrane 67.44 67.78
CDY21077 Canola cytosol 67.95 67.6
CDY34597 Canola cytosol 67.95 67.6
KRH59271 Soybean cytosol 67.69 67.52
CDY09858 Canola cytosol 66.92 67.44
CDX70567 Canola cytosol 66.92 67.44
CDX69577 Canola cytosol 66.92 67.44
Bra016746.1-P Field mustard cytosol 67.69 67.35
CDX78579 Canola cytosol, golgi, plasma membrane 66.92 67.27
Solyc02g093430.2.1 Tomato cytosol, golgi, plasma membrane 66.92 67.27
Bra006256.1-P Field mustard cytosol 66.92 67.27
Bra008753.1-P Field mustard cytosol 66.67 67.18
Bra019802.1-P Field mustard cytosol 67.18 67.18
AT3G27540.1 Thale cress cytosol, golgi, plasma membrane 67.18 67.18
CDY19406 Canola cytosol 67.44 67.09
CDX91060 Canola cytosol, golgi, plasma membrane 66.41 66.75
KRH43122 Soybean cytosol 66.92 66.75
CDX98021 Canola cytosol 67.18 66.67
Bra023467.1-P Field mustard cytosol, golgi, peroxisome 66.15 66.49
Solyc12g035470.1.1 Tomato cytosol 66.15 66.49
PGSC0003DMT400040682 Potato cytosol 66.15 66.49
CDY68430 Canola cytosol, golgi, peroxisome 66.15 66.49
PGSC0003DMT400011491 Potato cytosol 67.18 66.0
KRG93199 Soybean cytosol, golgi, plasma membrane 65.13 65.8
AT1G67880.1 Thale cress golgi 65.38 65.38
CDY28838 Canola golgi 65.64 65.31
CDY56530 Canola golgi 65.64 65.31
CDY49064 Canola golgi, plasma membrane, plastid 64.1 65.1
CDY37511 Canola golgi 63.59 64.92
VIT_14s0066g00350.t01 Wine grape cytosol, golgi, plasma membrane 67.95 64.16
Solyc05g013580.2.1 Tomato cytosol 55.13 62.87
AT3G26445.1 Thale cress extracellular, golgi 16.92 55.93
TraesCS5D01G056900.1 Wheat golgi, mitochondrion, plastid 46.92 50.0
VIT_01s0137g00810.t01 Wine grape cytosol 69.23 40.79
Protein Annotations
EnsemblPlants:TraesCS6D01G192500.1EnsemblPlantsGene:TraesCS6D01G192500GO:GO:0003674GO:GO:0003824GO:GO:0003830GO:GO:0005575
GO:GO:0005975GO:GO:0006464GO:GO:0006487GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0019538InterPro:Glyco_trans_17KEGG:00510+2.4.1.144
PANTHER:PTHR12224PANTHER:PTHR12224:SF5PFAM:PF04724TMHMM:TMhelixMapMan:35.2:
Description
No Description!
Coordinates
chr6D:-:266444755..266447032
Molecular Weight (calculated)
45446.8 Da
IEP (calculated)
7.372
GRAVY (calculated)
-0.215
Length
390 amino acids
Sequence
(BLAST)
001: MESAGYYTNC KKTDGICEGI CDGEHGSKAV LSMSRLKCAL RGFDLKALLF LLIGVPIIIF VIYVHGQKVT YFLRPIWEKP PKPFTVLPHY YHENASMANL
101: CKLHGWKVRE APRRVFDAVL FSNELDILDI RWHELSPYVS EFVLLESNST FTGLEKKLHF KENRQKFEFA ESRLTYGMIG GRFVKGENPF VEESYQRVAL
201: DQLLKIAGIT DDDLLIMSDV DEIPSGHTIN LLRWCDDTPE ILHLQLKNYL YSFQFMLDDK SWRASVHRYR AGKTRYAHYR QTDDLLADSG WHCSFCFRYI
301: NDFVFKMKAY SHVDRIRFSY FLNPKRIQHV ICQGADLFDM LPEEYTFQEI IAKLGPIPST YSAVHLPAYL LEKVDQYRYL LPGNCMRESG
Best Arabidopsis Sequence Match ( AT5G14480.1 )
(BLAST)
001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
Arabidopsis Description
At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.