Factsheet for TraesCS5D01G056900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	98.09	98.09
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	99.45	97.85
HORVU5Hr1G011270.1	Barley	golgi, plastid	97.54	95.97
OQU79586	Sorghum	mitochondrion	79.78	80.22
Os12t0611900-01	Rice	golgi, mitochondrion	79.23	79.67
Zm00001d041299_P001	Maize	golgi, mitochondrion	78.96	79.4
TraesCSU01G026400.1	Wheat	golgi	70.77	68.52
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	71.31	68.5
GSMUA_Achr7P01000_001	Banana	golgi	61.2	62.05
GSMUA_Achr4P31720_001	Banana	mitochondrion	60.11	60.61
KRH03667	Soybean	golgi, mitochondrion	61.2	60.54
KRH20138	Soybean	golgi, mitochondrion	60.11	59.46
VIT_11s0016g05630.t01	Wine grape	mitochondrion	58.74	59.23
AT2G13290.1	Thale cress	golgi	56.83	57.62
CDY37205	Canola	golgi	57.1	57.58
CDX81441	Canola	golgi	57.1	57.58
Bra037205.1-P	Field mustard	golgi	57.1	57.58
CDX81440	Canola	golgi	56.28	57.22
Solyc07g008030.1.1	Tomato	mitochondrion	54.37	53.35
PGSC0003DMT400079376	Potato	golgi, mitochondrion	54.1	53.08
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	50.0	46.92
TraesCS2D01G336600.1	Wheat	cytosol	48.09	45.36

Protein Annotations

EnsemblPlants:TraesCS5D01G056900.1	EnsemblPlantsGene:TraesCS5D01G056900	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	KEGG:00510+2.4.1.144
PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	PFAM:PF04724	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:-:52399623..52400723

Molecular Weight (calculated)

42330.2 Da

IEP (calculated)

8.357

GRAVY (calculated)

-0.117

Length

366 amino acids

Sequence
(BLAST)

001: MAGNSVNLPH ATRRRSTLAF KFLIPFVLVL SVSVIAVTQY FQSISYFLRP LWDTPPKPFT RIPHYYAPNM SMHQLCQLHG WGILSSPRRV FDAVLFSNEL
101: DVLEIRYHEL FPYVDRFVIL EANATFTGIP KSLTFFENLN RFAFASSKIV YDMLPIGELD PDSRRMPFLV EAGHRRALNN LLKRSGIAVG DVLIMADADE
201: IPSPETVQLL KWCDGIPPIM HLELKNYMYS FEYHVDQNSW RTTAHVFTER TKYQHSRQTD LMLADAGWHC SFCFREIKEF AFKMKAYSHA DRVKHDIFLN
301: PDRIQRVICN GDNIFDMLPE EYTFSDLFKK MGPIPRSASA VHLPSYLIRN ADSYRFLLPG GCLRPG

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.