CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03667	Soybean	golgi, mitochondrion	92.43	92.43
VIT_11s0016g05630.t01	Wine grape	mitochondrion	77.3	78.79
Solyc07g008030.1.1	Tomato	mitochondrion	68.65	68.1
PGSC0003DMT400079376	Potato	golgi, mitochondrion	68.38	67.83
CDX81440	Canola	golgi	64.86	66.67
AT2G13290.1	Thale cress	golgi	64.86	66.48
Bra037205.1-P	Field mustard	golgi	64.32	65.56
CDY37205	Canola	golgi	64.32	65.56
CDX81441	Canola	golgi	64.32	65.56
GSMUA_Achr4P31720_001	Banana	mitochondrion	63.78	65.01
GSMUA_Achr7P01000_001	Banana	golgi	62.97	64.54
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	59.46	60.11
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	59.46	60.11
OQU79586	Sorghum	mitochondrion	58.92	59.89
Os12t0611900-01	Rice	golgi, mitochondrion	58.38	59.34
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	59.46	59.14
Zm00001d041299_P001	Maize	golgi, mitochondrion	58.11	59.07
HORVU5Hr1G011270.1	Barley	golgi, plastid	58.92	58.6
TraesCS6B01G103200.1	Wheat	golgi	58.38	56.84
TraesCSU01G026400.1	Wheat	golgi	57.84	56.61
HORVU6Hr1G013610.2	Barley	golgi, mitochondrion	58.65	56.51
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	57.3	55.64
KRG97530	Soybean	cytosol	55.95	52.81
KRG93199	Soybean	cytosol, golgi, plasma membrane	54.86	52.59
KRH31342	Soybean	cytosol	55.68	52.55
KRH59271	Soybean	cytosol	54.32	51.41
KRG94031	Soybean	cytosol, golgi, plasma membrane	53.51	51.16
KRH43122	Soybean	cytosol	54.05	51.15
TraesCS6A01G077400.1	Wheat	mitochondrion	50.27	50.68

Protein Annotations

KEGG:00510+2.4.1.144	EntrezGene:100807933	MapMan:35.2	EMBL:ACUP02008241	EnsemblPlantsGene:GLYMA_13G158900	GO:GO:0003674
GO:GO:0003824	GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17	UniProt:I1LZQ1	EnsemblPlants:KRH20138	ProteinID:KRH20138
ProteinID:KRH20138.1	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	MetaCyc:PWY-7238	MetaCyc:PWY-7347
MetaCyc:PWY-7426	TMHMM:TMhelix	UniParc:UPI000233B22C	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:27410329..27412947

Molecular Weight (calculated)

42900.1 Da

IEP (calculated)

8.187

GRAVY (calculated)

-0.123

Length

370 amino acids

Sequence
(BLAST)

001: MFPLQVRGLA PRPHLISRQK PPMFFCVVLL LLVPICMIGI FIHGQKITYF FRPLWDNPPA PFTSIPHYYA ENVSMEHLCH LHGWSLRSEP RRIFDAVIFS
101: NELDMLEIRW HELSPYVSKF VILESNTTFT GIPKHHFFAL NWARFAFAKQ KIVHGIHPGR VAVPGSHEDP FVLESKQRGA MNALLCRAGI SNGDILLMSD
201: TDEIPSPHTL KLLQWCDGIP PIMHLELRHY MYSFEFPVDY SSWRATAHVY GPQTQYRHSR QTDVIFSDAG WHCSFCFQYI SEYVFKMTAY SHADRVKRKY
301: FLSHSRIQDK ICKGDDLFDM LPEEYSFHEL IKKMGSIPRS ASAVHLPAYL IENADKFKFL LPGGCLRPPE

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.