Factsheet for Os12t0611900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
golgi 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041299_P001	Maize	golgi, mitochondrion	81.32	81.32
OQU79586	Sorghum	mitochondrion	80.77	80.77
TraesCS5D01G056900.1	Wheat	golgi, mitochondrion, plastid	79.67	79.23
TraesCS5A01G046600.1	Wheat	golgi, mitochondrion, plastid	79.67	79.23
HORVU5Hr1G011270.1	Barley	golgi, plastid	79.95	78.23
TraesCS5B01G051200.1	Wheat	golgi, mitochondrion	79.95	78.23
TraesCSU01G026400.1	Wheat	golgi	70.6	67.99
TraesCSU01G026800.1	Wheat	mitochondrion, peroxisome, vacuole	70.05	66.93
GSMUA_Achr7P01000_001	Banana	golgi	63.19	63.71
GSMUA_Achr4P31720_001	Banana	mitochondrion	61.81	61.98
KRH03667	Soybean	golgi, mitochondrion	60.16	59.19
VIT_11s0016g05630.t01	Wine grape	mitochondrion	58.79	58.95
Bra037205.1-P	Field mustard	golgi	58.52	58.68
CDY37205	Canola	golgi	58.52	58.68
CDX81441	Canola	golgi	58.52	58.68
AT2G13290.1	Thale cress	golgi	57.97	58.45
KRH20138	Soybean	golgi, mitochondrion	59.34	58.38
CDX81440	Canola	golgi	57.69	58.33
Solyc07g008030.1.1	Tomato	mitochondrion	54.95	53.62
PGSC0003DMT400079376	Potato	golgi, mitochondrion	54.4	53.08
Os02t0595100-01	Rice	golgi	50.0	49.19
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	50.0	46.91
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	49.45	46.04

Protein Annotations

KEGG:00510+2.4.1.144	MapMan:35.2	EntrezGene:4352772	ProteinID:ABA99377.1	EMBL:AK101128	ProteinID:BAF30274.1
ProteinID:BAT18043.1	ProteinID:EEE53595.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003830	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_17
EnsemblPlantsGene:Os12g0611900	EnsemblPlants:Os12t0611900-01	PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF1	UniProt:Q2QMA5
TMHMM:TMhelix	UniParc:UPI0000680C4C	RefSeq:XP_015618395.1	RefSeq:XP_015618396.1	RefSeq:XP_015618397.1	RefSeq:XP_015618400.1
SEG:seg	:	:	:	:	:

Description

Glycosyl transferase, family 17 protein. (Os12t0611900-01)

Coordinates

chr12:+:25883105..25885917

Molecular Weight (calculated)

41851.2 Da

IEP (calculated)

8.626

GRAVY (calculated)

-0.043

Length

364 amino acids

Sequence
(BLAST)

001: MARTSPFPPL TRRKIASLKL LIPCVLVLSV AVIVVTQYFH NISYLLRPLW DTPPKPFIRI PHYYAPNISM PQLCQLHGWG ILPTPRRVFD AVLFSNELDI
101: LEIRYGELLP YVDRFVILEA NATFTGIPKS LSFLENINRF AFAGSKIVYD MLPVMEMDPG SHRQPFHVEA GHRRALNMLL RRSGIAVGDV LIMADADEIP
201: SPETVQLLKW CDGIPQVMHL ELKNYMYSFE FPIDYNSWRA TAHVFTEHTL YRHSRQSNLL LADAGWHCSF CFKDIKEFAF KMKAYSHADR VKQDSFLNPD
301: RIQRVICNGE DLFDMLPEEY TFKDLFKKMG PIPKSGSAVH LPSYLIKNAD KFRFLLPGGC LRPG

Best Arabidopsis Sequence Match ( AT2G13290.1 )
(BLAST)

001: MTIRSLRKPP PVKLVFPTLI ILFLTCLLCI LTNFQTISYL FRPLWDKPPP PFKRIPHYYA ENVSMGHLCE LHGWTPRLEP RRVFDAIIFS NELDLLEVRW
101: RELEPYVSKF VILESNTTFT GIPKPLFFDS NKERFAFAEG KIVHGVFPGK KRSTGQPYED PFLLEGQQRV AMNWLLREAG VSDGDAVIMS DADEIPSPHT
201: VKFLQWCDGI PDVMHLEMRE YMYSFEFPVD YSSWRASVHI YSRKWTQYRH SRQTDLILSD AGWHCSFCFR RLNEFVFKMK GYSHADRVKR KEFLDYQRIQ
301: KHICKGYDLF DMLPEKYSFQ ELISKIGPIP PSASAVHLPA FLIQNAARFR FLLPGGCLRE P

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.