Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21077 | Canola | cytosol | 95.66 | 95.66 |
| CDY34597 | Canola | cytosol | 95.41 | 95.41 |
| Bra016746.1-P | Field mustard | cytosol | 95.41 | 95.41 |
| CDY19406 | Canola | cytosol | 92.35 | 92.35 |
| CDX98021 | Canola | cytosol | 91.84 | 91.6 |
| Bra019802.1-P | Field mustard | cytosol | 91.07 | 91.54 |
| AT1G67880.1 | Thale cress | golgi | 81.38 | 81.79 |
| KRH31342 | Soybean | cytosol | 78.57 | 78.57 |
| KRG97530 | Soybean | cytosol | 78.32 | 78.32 |
| KRH59271 | Soybean | cytosol | 77.81 | 78.01 |
| KRH43122 | Soybean | cytosol | 77.3 | 77.49 |
| PGSC0003DMT400011491 | Potato | cytosol | 77.04 | 76.07 |
| PGSC0003DMT400047881 | Potato | cytosol | 76.79 | 75.82 |
| AT3G27540.1 | Thale cress | cytosol, golgi, plasma membrane | 72.7 | 73.08 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 21.68 | 72.65 |
| AT5G14480.1 | Thale cress | cytosol | 71.43 | 72.35 |
| Solyc05g013580.2.1 | Tomato | cytosol | 61.48 | 70.47 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 68.11 | 68.81 |
| AT3G26445.1 | Thale cress | extracellular, golgi | 20.66 | 68.64 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 68.11 | 68.46 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 67.86 | 68.21 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 67.6 | 68.12 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 67.6 | 67.95 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 67.09 | 67.78 |
| Zm00001d050961_P001 | Maize | plasma membrane | 67.09 | 67.78 |
| AT3G01620.1 | Thale cress | cytosol, golgi, plasma membrane | 67.09 | 67.78 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 66.84 | 67.53 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 66.84 | 67.53 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 66.84 | 67.53 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 66.84 | 67.53 |
| GSMUA_Achr11P... | Banana | cytosol | 66.58 | 67.44 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 66.84 | 67.35 |
| Os02t0595100-01 | Rice | golgi | 63.52 | 67.3 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 67.09 | 67.26 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 66.84 | 67.18 |
| Zm00001d003292_P001 | Maize | plasma membrane | 66.33 | 67.01 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 66.33 | 67.01 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 66.07 | 66.75 |
| Zm00001d017085_P002 | Maize | golgi | 66.07 | 66.75 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 65.82 | 66.49 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 65.31 | 59.95 |
| AT2G13290.1 | Thale cress | golgi | 51.53 | 55.96 |
| VIT_01s0137g00810.t01 | Wine grape | cytosol | 81.89 | 48.49 |
Protein Annotations
| KEGG:00510+2.4.1.144 | MapMan:35.2 | EntrezGene:837857 | UniProt:A0A178W674 | ProteinID:AEE28957.1 | ArrayExpress:AT1G12990 |
| EnsemblPlantsGene:AT1G12990 | RefSeq:AT1G12990 | TAIR:AT1G12990 | RefSeq:AT1G12990-TAIR-G | EnsemblPlants:AT1G12990.1 | TAIR:AT1G12990.1 |
| Unigene:At.11247 | UniProt:F4HP06 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 |
| InterPro:Glyco_trans_17 | EMBL:KJ139011 | RefSeq:NP_172759.2 | ProteinID:OAP13574.1 | PFAM:PF04724 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR12224 | PANTHER:PTHR12224:SF4 | TMHMM:TMhelix | UniParc:UPI0000196C8D | : | : |
Description
Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4HP06]
Coordinates
chr1:+:4433605..4436102
Molecular Weight (calculated)
45919.4 Da
IEP (calculated)
8.030
GRAVY (calculated)
-0.234
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MWWMMGEAGG HYCSKKTDDI CGGVCSQEPG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYVHGQK ISYFLRPLWE SPPKPFHDIP HYYHENASME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.