Factsheet for VIT_01s0137g00810.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59271	Soybean	cytosol	48.79	82.61
KRG97530	Soybean	cytosol	48.79	82.4
KRH43122	Soybean	cytosol	48.49	82.1
AT1G12990.1	Thale cress	cytosol	48.49	81.89
Bra016746.1-P	Field mustard	cytosol	48.49	81.89
CDY21077	Canola	cytosol	48.49	81.89
KRH31342	Soybean	cytosol	48.49	81.89
Bra004065.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	41.54	81.6
CDY34597	Canola	cytosol	48.04	81.12
Bra019802.1-P	Field mustard	cytosol	47.43	80.51
PGSC0003DMT400047881	Potato	cytosol	48.04	80.1
PGSC0003DMT400011491	Potato	cytosol	47.89	79.85
CDY19406	Canola	cytosol	47.28	79.85
CDX98021	Canola	cytosol	47.28	79.64
VIT_14s0066g00350.t01	Wine grape	cytosol, golgi, plasma membrane	49.4	79.18
AT1G67880.1	Thale cress	golgi	46.07	78.21
CDY56530	Canola	golgi	46.22	78.06
CDY28838	Canola	golgi	46.07	77.81
Solyc05g013580.2.1	Tomato	cytosol	38.97	75.44
HORVU2Hr1G082670.1	Barley	cytosol	12.69	71.79
GSMUA_Achr8P28540_001	Banana	cytosol, golgi, plasma membrane	42.15	71.72
GSMUA_Achr11P...	Banana	cytosol	40.94	70.03
GSMUA_Achr6P12150_001	Banana	cytosol, golgi, plasma membrane	40.94	69.85
GSMUA_Achr10P...	Banana	cytosol, golgi, plasma membrane	40.94	69.85
GSMUA_Achr6P28040_001	Banana	cytosol, golgi, plasma membrane	40.79	69.59
TraesCS6A01G209000.1	Wheat	cytosol, golgi, plasma membrane	40.94	69.49
TraesCS6D01G192500.1	Wheat	cytosol, golgi, plasma membrane	40.79	69.23
HORVU6Hr1G053550.2	Barley	cytosol, golgi, plasma membrane	40.79	69.23
GSMUA_Achr9P07530_001	Banana	cytosol, golgi, plasma membrane	40.48	68.89
TraesCS6B01G238000.1	Wheat	cytosol, golgi, plasma membrane	40.48	68.72
Os02t0595100-01	Rice	golgi	38.22	68.38
Os04t0477500-02	Rice	cytosol, golgi, plasma membrane	40.03	68.3
EES12371	Sorghum	cytosol, golgi, plasma membrane	39.88	68.04
KXG30544	Sorghum	cytosol, golgi, plasma membrane	39.73	67.78
Zm00001d050961_P001	Maize	plasma membrane	39.73	67.78
TraesCS2D01G336600.1	Wheat	cytosol	39.58	67.53
Zm00001d003292_P001	Maize	plasma membrane	39.58	67.53
TraesCS2B01G355800.1	Wheat	cytosol	39.43	67.27
TraesCS2A01G326200.1	Wheat	cytosol, golgi, plasma membrane	39.43	67.27
Zm00001d017085_P002	Maize	golgi	39.12	66.75
Os02t0594900-01	Rice	cytosol, golgi, plasma membrane	39.43	66.75
AT3G26445.1	Thale cress	extracellular, golgi	10.88	61.02
HORVU2Hr1G082660.5	Barley	golgi, mitochondrion	39.27	60.89
VIT_11s0016g05630.t01	Wine grape	mitochondrion	32.63	59.5

Protein Annotations

KEGG:00510+2.4.1.144	EntrezGene:100250796	wikigene:100250796	EntrezGene:100254142	wikigene:100254142	MapMan:35.2
ProteinID:CCB43978	ProteinID:CCB43978.1	UniProt:F6GVL6	EMBL:FN594954	GO:GO:0003674	GO:GO:0003824
GO:GO:0003830	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0019538	InterPro:Glyco_trans_17	EntrezGene:LOC100250796	wikigene:LOC100250796	EntrezGene:LOC100254142	wikigene:LOC100254142
PFAM:PF04724	PANTHER:PTHR12224	PANTHER:PTHR12224:SF4	TIGR:TC53149	TMHMM:TMhelix	UniParc:UPI000210AC48
ArrayExpress:VIT_01s0137g00810	EnsemblPlantsGene:VIT_01s0137g00810	EnsemblPlants:VIT_01s0137g00810.t01	unigene:Vvi.6811	RefSeq:XP_002285536	RefSeq:XP_002285536.1
RefSeq:XP_002285541	RefSeq:XP_002285541.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:7290569..7296479

Molecular Weight (calculated)

77590.0 Da

IEP (calculated)

7.845

GRAVY (calculated)

-0.371

Length

662 amino acids

Sequence
(BLAST)

001: MFMLGSEGDH YCSKKTDDIC GDVCGQESSR ALSMSRLRCI LRGLDFKTYI FLFVLVPTCF FGIYVHGQKI SYFLRPLWES PPKPFHDITH YYQENVTMEN
101: LCKLHGWGIR EYPRRVFDAV LFSNELDILT LRWKELYPYI TEFVLLESNS TFTGLPKPLV FASNRDKFKF VEPRLTYGTI GGRFRRGENP FVEEAYQRVA
201: LDQLLKIAGI TDDDLLIMSD VDEIPSKHTI NLLRWCDDIP PILHLRLKNY LYSFEFFVDN NSWRASVHRY QTGKTRYAHY RQTDDILADA GWHCSFCFRH
301: ISEFIFKMKA YSHFDRVRFS HYLNPERVQK VICKGADLFD MLPEEYTFKE IIGKLGPIPH SYSAVHLPSY LLENAKKYKF LLPGNCFRER EKIDISWAFS
401: LGKFCFETNL SIYVAIQLLD LYHFIAFGPL IDYNVESIVT CGKCIPINHQ RLVVRYQKNR MQQGVRFQQQ RCILHRREWH SANDSNNHVS GTQLLVKPCI
501: DSPQLLDDPH IMFKEGHTLH LREWHSANDS NNHVSGPQLL LKPRIEFPQL LDDPPIMFKE GHTLQSGGWH VNSSHQNGWH HSEKLPINSN NDFVVMHRFH
601: EVHVPVRTRV VQVVTYEHHT SANNCHHQQV CNTENRGYQK GPWLMKGLEE ETSDVIKVFI KN

Best Arabidopsis Sequence Match ( AT1G12990.1 )
(BLAST)

001: MWWMMGEAGG HYCSKKTDDI CGGVCSQEPG RFFSFSRLCC ALRGVDMKTY IFLLVIVPTC VLAGYVHGQK ISYFLRPLWE SPPKPFHDIP HYYHENASME
101: TLCKLHGWGV RDYPRRVYDA VLFSNELDIL AVRWRELFPY ITQFVLLESN TTFTGLPKPL VFAAHRDEFK FIESRLTYGT VGGRFVKGQN PFYEEAYQRV
201: ALDQLLRIAG ITDDDLLLMS DVDEIPSRHT INLLRWCDEI PKILHLRLKN YLYSFEFLVD NKSWRASIHR YETGKTRYAH YRQSDEILAD AGWHCSFCFR
301: RISEFIFKMK AYSHNDRVRF GHFLNPKRVQ RVICKGADLF DMLPEEYTFK EIIGKMGPIP HSFSAVHLPS YLLENADKYR FLLPGNCIRE SE

Arabidopsis Description

Beta-1,4-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4HP06]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.