Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008753.1-P | Field mustard | cytosol | 99.22 | 99.22 |
| CDY09858 | Canola | cytosol | 98.19 | 98.19 |
| CDX78579 | Canola | cytosol, golgi, plasma membrane | 92.25 | 92.01 |
| AT5G14480.1 | Thale cress | cytosol | 91.99 | 91.99 |
| CDX70567 | Canola | cytosol | 91.47 | 91.47 |
| CDX91060 | Canola | cytosol, golgi, plasma membrane | 89.15 | 88.92 |
| CDY68430 | Canola | cytosol, golgi, peroxisome | 89.15 | 88.92 |
| CDY49064 | Canola | golgi, plasma membrane, plastid | 78.04 | 78.65 |
| CDY37511 | Canola | golgi | 77.0 | 78.01 |
| CDY13721 | Canola | cytosol | 77.52 | 77.12 |
| KRG94031 | Soybean | cytosol, golgi, plasma membrane | 76.49 | 76.49 |
| CDX83706 | Canola | cytosol, golgi, plasma membrane | 76.74 | 76.35 |
| KRG93199 | Soybean | cytosol, golgi, plasma membrane | 74.68 | 74.87 |
| HORVU2Hr1G082670.1 | Barley | cytosol | 22.48 | 74.36 |
| PGSC0003DMT400040682 | Potato | cytosol | 73.64 | 73.45 |
| Solyc12g035470.1.1 | Tomato | cytosol | 73.13 | 72.94 |
| Solyc02g093430.2.1 | Tomato | cytosol, golgi, plasma membrane | 72.61 | 72.42 |
| PGSC0003DMT400032896 | Potato | cytosol, golgi, plasma membrane | 72.35 | 72.16 |
| CDY28838 | Canola | golgi | 72.87 | 71.94 |
| CDY56530 | Canola | golgi | 72.61 | 71.68 |
| CDY34597 | Canola | cytosol | 72.35 | 71.43 |
| CDY21077 | Canola | cytosol | 71.83 | 70.92 |
| CDY19406 | Canola | cytosol | 71.32 | 70.41 |
| VIT_14s0066g00350.t01 | Wine grape | cytosol, golgi, plasma membrane | 74.94 | 70.22 |
| CDX98021 | Canola | cytosol | 70.8 | 69.72 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plasma membrane | 69.51 | 69.33 |
| GSMUA_Achr6P12150_001 | Banana | cytosol, golgi, plasma membrane | 69.25 | 69.07 |
| GSMUA_Achr8P28540_001 | Banana | cytosol, golgi, plasma membrane | 68.48 | 68.12 |
| GSMUA_Achr9P07530_001 | Banana | cytosol, golgi, plasma membrane | 68.48 | 68.12 |
| Os02t0595100-01 | Rice | golgi | 64.34 | 67.3 |
| TraesCS6D01G192500.1 | Wheat | cytosol, golgi, plasma membrane | 67.44 | 66.92 |
| TraesCS6A01G209000.1 | Wheat | cytosol, golgi, plasma membrane | 67.18 | 66.67 |
| Os04t0477500-02 | Rice | cytosol, golgi, plasma membrane | 66.67 | 66.49 |
| TraesCS6B01G238000.1 | Wheat | cytosol, golgi, plasma membrane | 66.93 | 66.41 |
| EES12371 | Sorghum | cytosol, golgi, plasma membrane | 66.41 | 66.24 |
| HORVU6Hr1G053550.2 | Barley | cytosol, golgi, plasma membrane | 66.67 | 66.15 |
| GSMUA_Achr11P... | Banana | cytosol | 65.63 | 65.63 |
| Zm00001d003292_P001 | Maize | plasma membrane | 65.63 | 65.46 |
| GSMUA_Achr6P28040_001 | Banana | cytosol, golgi, plasma membrane | 65.37 | 65.21 |
| TraesCS2A01G326200.1 | Wheat | cytosol, golgi, plasma membrane | 65.12 | 64.95 |
| TraesCS2D01G336600.1 | Wheat | cytosol | 65.12 | 64.95 |
| Os02t0594900-01 | Rice | cytosol, golgi, plasma membrane | 65.37 | 64.71 |
| Zm00001d050961_P001 | Maize | plasma membrane | 64.86 | 64.69 |
| Zm00001d017085_P002 | Maize | golgi | 64.86 | 64.69 |
| TraesCS2B01G355800.1 | Wheat | cytosol | 64.86 | 64.69 |
| KXG30544 | Sorghum | cytosol, golgi, plasma membrane | 64.34 | 64.18 |
| HORVU2Hr1G082660.5 | Barley | golgi, mitochondrion | 64.6 | 58.55 |
| CDX81440 | Canola | golgi | 48.84 | 52.5 |
| CDX81441 | Canola | golgi | 48.84 | 52.07 |
| CDY37205 | Canola | golgi | 48.84 | 52.07 |
Protein Annotations
| KEGG:00500+2.4.1.14 | KEGG:00510+2.4.1.144 | MapMan:35.2 | GO:A0A078BZ00 | EnsemblPlants:CDX69577 | ProteinID:CDX69577 |
| ProteinID:CDX69577.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003830 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00135590001 | InterPro:Glyco_trans_17 | PFAM:PF04724 |
| PANTHER:PTHR12224 | PANTHER:PTHR12224:SF1 | MetaCyc:PWY-7238 | MetaCyc:PWY-7347 | MetaCyc:PWY-7426 | TMHMM:TMhelix |
| UniPathway:UPA00378 | UniParc:UPI0004EE3069 | : | : | : | : |
Description
BnaA10g19260D
Coordinates
chrLK031790:-:887722..889555
Molecular Weight (calculated)
45209.1 Da
IEP (calculated)
7.781
GRAVY (calculated)
-0.312
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGYYSSKK TDDICDDVCG QDGSRAGKAF SRVRCILRGL DFKTYIFFFT IIPLFVFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHP NASMETLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFAAN RGEFEFVEPR LAYGNIGGRF KRGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTIDLLR WCDGYPPVLH LQLKNYLYSF EYFVDSKSWR ASVHRYKPGK TRYAHFRQGD TLLADSGWHC SFCFRRISEF
301: VFKMKAYSHT DRVRFSHYLN PERIQDVICR GTDLFDMFPE EYTFREIIAK LGPIPRSYSA VHLPGHLIEK AESYKYLLPG NCLRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFAAN RGEFEFVEPR LAYGNIGGRF KRGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTIDLLR WCDGYPPVLH LQLKNYLYSF EYFVDSKSWR ASVHRYKPGK TRYAHFRQGD TLLADSGWHC SFCFRRISEF
301: VFKMKAYSHT DRVRFSHYLN PERIQDVICR GTDLFDMFPE EYTFREIIAK LGPIPRSYSA VHLPGHLIEK AESYKYLLPG NCLRESG
001: MSDGYYSSKK TDDICDDVCG QDGSRAAKAF SRVRCVLRGF DFKTYIFFFT IVPIFIFGVY LHGQKLTYFL RPLWESPPKP FQTLPHYYHE NASMATLCSL
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
101: HGWKHRESPR RVFDAVLFSN EVDMLTIRWK ELYPYITQFV ILESNSTFTG LPKPLVFNGN RAKFEFAEPR LSYGNIAGRF KKGENPFVEE AYQRIALDQL
201: IRLAGIEEDD LLIMSDVDEI PSAHTINLLR WCDGYPPILH LQLKNYLYSF EYFVDNKSWR ASIHQYKPGK TRYAHFRQGN TLLADSGWHC SFCFRHISEF
301: IFKMKAYSHN DRVRFSHYLN PKRIQDVICK GTDLFDMLPE EYTFREIIGK LGPIPRSYSA VHLPAHLIEK AESYKYLLPG NCIRESG
Arabidopsis Description
At5g14480 [Source:UniProtKB/TrEMBL;Acc:Q9LY81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.