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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000304.1-P
Bra001217.1-P
Bra001900.1-P
Bra001911.1-P
Bra002147.1-P
Bra002588.1-P
Bra003301.1-P
Bra004168.1-P
Bra005144.1-P
Bra005499.1-P
Bra005893.1-P
Bra006236.1-P
Bra006730.1-P
Bra007363.1-P
Bra007638.1-P
Bra007884.1-P
Bra008782.1-P
Bra009744.1-P
Bra010501.1-P
Bra010569.1-P
Bra010760.1-P
Bra010807.1-P
Bra011138.1-P
Bra011636.1-P
Bra011662.1-P
Bra014106.1-P
Bra014371.1-P
Bra014602.1-P
Bra014945.1-P
Bra015304.1-P
Bra015432.1-P
Bra015721.1-P
Bra016263.1-P
Bra017318.1-P
Bra017747.1-P
Bra018324.1-P
Bra018858.1-P
Bra020748.1-P
Bra021172.1-P
Bra021379.1-P
Bra021640.1-P
Bra021765.1-P
Bra021848.1-P
Bra021909.1-P
Bra022283.1-P
Bra022568.1-P
Bra022806.1-P
Bra022976.1-P
Bra023170.1-P
Bra023448.1-P
Bra025115.1-P
Bra025284.1-P
Bra025312.1-P
Bra025431.1-P
Bra026548.1-P
Bra027006.1-P
Bra027180.1-P
Bra028174.1-P
Bra028181.1-P
Bra028406.1-P
Bra029605.1-P
Bra029883.1-P
Bra030181.1-P
Bra030182.1-P
Bra030808.1-P
Bra030911.1-P
Bra032517.1-P
Bra032954.1-P
Bra033491.1-P
Bra033493.1-P
Bra033886.1-P
Bra035851.1-P
Bra036240.1-P
Bra036288.1-P
Bra036636.1-P
Bra036832.1-P
Bra037896.1-P
Bra037955.1-P
Bra039309.1-P
Bra040291.1-P
Bra040595.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G47620.1 Bra036240.1-P AT1G03130.1 21798944
AT3G47620.1 Bra015304.1-P AT1G04330.1 21798944
AT3G47620.1 Bra032517.1-P AT1G04330.1 21798944
AT3G47620.1 Bra015432.1-P AT1G05510.1 21798944
AT3G47620.1 Bra010807.1-P AT1G29920.1 21798944
AT3G47620.1 Bra021909.1-P AT1G29920.1 21798944
AT3G47620.1 Bra022976.1-P AT1G29920.1 21798944
AT3G47620.1 Bra030181.1-P AT1G29920.1 21798944
AT3G47620.1 Bra030182.1-P AT1G29920.1 21798944
AT3G47620.1 Bra023170.1-P AT1G31240.1 21798944
AT3G47620.1 Bra018858.1-P AT1G50575.1 21798944
AT3G47620.1 Bra014371.1-P AT1G54030.1 21798944
AT3G47620.1 Bra030911.1-P AT1G54030.1 21798944
AT3G47620.1 Bra037955.1-P AT1G54030.1 21798944
AT3G47620.1 Bra030808.1-P AT1G54320.1 21798944
AT3G47620.1 Bra027006.1-P AT1G62990.1 21798944
AT3G47620.1 Bra036636.1-P AT1G62990.1 21798944
AT3G47620.1 Bra004168.1-P AT1G66430.1 21798944
AT3G47620.1 Bra007884.1-P AT1G69810.1 21798944
AT3G47620.1 Bra016263.1-P AT1G69810.1 21798944
AT3G47620.1 Bra015721.1-P AT1G76760.1 21798944
AT3G47620.1 Bra025115.1-P AT2G03500.1 21798944
AT3G47620.1 Bra026548.1-P AT2G03500.1 21798944
AT3G47620.1 Bra018324.1-P AT2G30260.1 21798944
AT3G47620.1 Bra021640.1-P AT2G30530.1 21798944
AT3G47620.1 Bra022806.1-P AT2G30530.1 21798944
AT3G47620.1 Bra021765.1-P AT2G31985.1 21798944
AT3G47620.1 Bra005499.1-P AT2G33390.1 21798944
AT3G47620.1 Bra021848.1-P AT2G33390.1 21798944
AT3G47620.1 Bra010807.1-P AT2G34420.1 21798944
AT3G47620.1 Bra021909.1-P AT2G34420.1 21798944
AT3G47620.1 Bra022976.1-P AT2G34420.1 21798944
AT3G47620.1 Bra030181.1-P AT2G34420.1 21798944
AT3G47620.1 Bra030182.1-P AT2G34420.1 21798944
AT3G47620.1 Bra017318.1-P AT2G35500.1 21798944
AT3G47620.1 Bra005144.1-P AT2G38000.1 21798944
AT3G47620.1 Bra000304.1-P AT2G43370.1 21798944
AT3G47620.1 Bra039309.1-P AT2G45850.1 21798944
AT3G47620.1 Bra014106.1-P AT2G47450.1 21798944
AT3G47620.1 Bra021379.1-P AT3G03000.1 21798944
AT3G47620.1 Bra020748.1-P AT3G06430.1 21798944
AT3G47620.1 Bra001217.1-P AT3G06780.1 21798944
AT3G47620.1 Bra029605.1-P AT3G06780.1 21798944
AT3G47620.1 Bra040291.1-P AT3G06780.1 21798944
AT3G47620.1 Bra029883.1-P AT3G10970.1 21798944
AT3G47620.1 Bra021172.1-P AT3G16250.1 21798944
AT3G47620.1 Bra027180.1-P AT3G16250.1 21798944
AT3G47620.1 Bra022283.1-P AT3G18140.1 21798944
AT3G47620.1 Bra001900.1-P AT3G23050.1 21798944
AT3G47620.1 Bra033886.1-P AT3G23050.1 21798944
AT3G47620.1 Bra001911.1-P AT3G23390.1 21798944
AT3G47620.1 Bra010760.1-P AT3G23390.1 21798944
AT3G47620.1 Bra014945.1-P AT3G23390.1 21798944
AT3G47620.1 Bra033491.1-P AT3G23390.1 21798944
AT3G47620.1 Bra032954.1-P AT3G26810.1 21798944
AT3G47620.1 Bra025284.1-P AT3G27540.1 21798944
AT3G47620.1 Bra025312.1-P AT3G27925.1 21798944
AT3G47620.1 Bra036832.1-P AT3G51180.1 21798944
AT3G47620.1 Bra003301.1-P AT3G57870.1 21798944
AT3G47620.1 Bra007363.1-P AT3G57870.1 21798944
AT3G47620.1 Bra014602.1-P AT3G57870.1 21798944
AT3G47620.1 Bra036288.1-P AT4G01920.1 21798944
AT3G47620.1 Bra037896.1-P AT4G09980.1 21798944
AT3G47620.1 Bra040595.1-P AT4G14980.1 21798944
AT3G47620.1 Bra033493.1-P AT4G15545.1 21798944
AT3G47620.1 Bra009744.1-P AT4G29820.1 21798944
AT3G47620.1 Bra011138.1-P AT4G29820.1 21798944
AT3G47620.1 Bra011636.1-P AT4G35770.1 21798944
AT3G47620.1 Bra010501.1-P AT4G36110.1 21798944
AT3G47620.1 Bra011662.1-P AT4G36110.1 21798944
AT3G47620.1 Bra017747.1-P AT4G36110.1 21798944
AT3G47620.1 Bra010569.1-P AT4G36690.1 21798944
AT3G47620.1 Bra005893.1-P AT5G06370.1 21798944
AT3G47620.1 Bra006236.1-P AT5G14070.1 21798944
AT3G47620.1 Bra008782.1-P AT5G14070.1 21798944
AT3G47620.1 Bra023448.1-P AT5G14070.1 21798944
AT3G47620.1 Bra002147.1-P AT5G18260.1 21798944
AT3G47620.1 Bra025431.1-P AT5G38420.1 21798944
AT3G47620.1 Bra028174.1-P AT5G38420.1 21798944
AT3G47620.1 Bra028181.1-P AT5G38420.1 21798944
AT3G47620.1 Bra028406.1-P AT5G38420.1 21798944
AT3G47620.1 Bra022568.1-P AT5G51910.1 21798944
AT3G47620.1 Bra002588.1-P AT5G59140.1 21798944
AT3G47620.1 Bra006730.1-P AT5G59140.1 21798944
AT3G47620.1 Bra007638.1-P AT5G63200.1 21798944
AT3G47620.1 Bra035851.1-P AT5G63200.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36943 Canola nucleus 37.98 93.65
CDY24170 Canola nucleus 48.28 92.59
AT3G47620.1 Thale cress nucleus 88.2 84.05
GSMUA_Achr6P02720_001 Banana nucleus 31.76 54.81
VIT_17s0000g06020.t01 Wine grape nucleus 42.92 54.35
GSMUA_Achr4P00500_001 Banana nucleus 31.12 53.31
KRH63357 Soybean nucleus 44.42 52.01
GSMUA_Achr7P20990_001 Banana nucleus 29.61 51.49
PGSC0003DMT400001613 Potato nucleus 45.71 51.45
Solyc03g116320.2.1 Tomato nucleus 44.64 50.86
KRH54542 Soybean nucleus 44.21 50.49
KRH03466 Soybean nucleus 42.92 48.43
KRH56919 Soybean nucleus 42.49 47.6
Bra004407.1-P Field mustard nucleus, plastid 32.4 47.04
Os06t0226700-01 Rice nucleus 37.55 45.22
Bra003986.1-P Field mustard cytosol 23.61 44.9
Bra007875.1-P Field mustard cytosol 23.39 44.31
EES07255 Sorghum nucleus 37.77 44.22
TraesCS6B01G334900.1 Wheat nucleus 37.98 44.03
Zm00001d037221_P001 Maize cytosol, nucleus, peroxisome 35.62 43.8
HORVU6Hr1G075650.1 Barley nucleus 37.77 43.78
Zm00001d052256_P001 Maize cytosol, nucleus, peroxisome 36.48 43.7
EER88112 Sorghum nucleus 36.91 43.65
Os02t0747400-01 Rice nucleus 38.2 43.41
TraesCS6D01G285600.1 Wheat nucleus 37.34 43.39
Zm00001d018045_P001 Maize cytosol, nucleus, peroxisome 37.12 43.25
Zm00001d044836_P001 Maize nucleus 33.05 43.14
TraesCS6A01G306500.1 Wheat nucleus 37.34 43.07
TraesCS7B01G091900.1 Wheat cytosol, nucleus, peroxisome 33.91 42.47
GSMUA_Achr7P17990_001 Banana nucleus 30.47 42.26
TraesCS7D01G187600.1 Wheat cytosol 34.98 40.75
HORVU7Hr1G038130.1 Barley nucleus 34.55 40.25
Bra026506.1-P Field mustard cytosol, mitochondrion, nucleus 18.24 39.35
Bra009667.1-P Field mustard nucleus 19.74 36.8
Bra028662.1-P Field mustard nucleus 17.81 36.24
Bra005984.1-P Field mustard nucleus 18.03 35.9
Bra009338.1-P Field mustard nucleus 18.03 35.59
Bra029366.1-P Field mustard cytosol 13.09 34.66
Bra025528.1-P Field mustard nucleus 15.24 31.7
Bra039096.1-P Field mustard nucleus 18.03 30.22
Bra025244.1-P Field mustard nucleus 19.53 29.64
Bra022568.1-P Field mustard cytosol 18.03 28.28
Bra027886.1-P Field mustard nucleus, plastid 23.82 28.17
Bra000395.1-P Field mustard nucleus 18.67 27.97
Bra004929.1-P Field mustard nucleus 19.1 27.47
Bra016090.1-P Field mustard nucleus 19.1 25.0
Bra008001.1-P Field mustard nucleus, plastid 19.1 23.8
Protein Annotations
MapMan:15.5.19EnsemblPlantsGene:Bra018126EnsemblPlants:Bra018126.1EnsemblPlants:Bra018126.1-PGO:GO:0000003GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006950GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0008283GO:GO:0009058GO:GO:0009719GO:GO:0009735
GO:GO:0009737GO:GO:0009739GO:GO:0009791GO:GO:0009987GO:GO:0010029GO:GO:0010229
GO:GO:0031347InterPro:IPR017887UniProt:M4DNN9PFAM:PF03634PFscan:PS51369PANTHER:PTHR31072
PANTHER:PTHR31072:SF70InterPro:TF_TCP_subgrInterPro:Transcription_factor_TCPUniParc:UPI000253F3F2SEG:seg:
Description
AT3G47620 (E=2e-126) AtTCP14 | AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor
Coordinates
chrA06:-:10447086..10448486
Molecular Weight (calculated)
50241.3 Da
IEP (calculated)
7.115
GRAVY (calculated)
-0.927
Length
466 amino acids
Sequence
(BLAST)
001: MDGGDNVGGG DDHNRHLHHH HHRPTFPFQL LGKRDPDDNN QQQQQQQQPS PSSSSSLFSL HQHQQLSQTQ PQPQQQKPQP QKDLQVTQEE TAVVVAKKPP
101: LKRASTKDRH TKVDGRGRRI RMPALCAARV FQLTRELGHK SDGETIEWLL QQAEPSVIAA TGTGTIPANF TSLNISLRSS GSSMSLPSHY RNAASTFSPN
201: NIFSPSLLQQ QQQRSGGGGF LHPHHHLQGR ATTSSLFPGI DNFTPTTSFL NFHNPTKQEG DQDSEELSPD KKRRLQTTSD LHHQHDQIGG YTLQSSNSGS
301: TATTAQIPGN FWMVAAAAAA GGNNNQTGGG SVGSGGGSGG GEPVWTFPSI NTAAAALYRS SVSGVSGGAV SSGLHFMNFA APMAFLTGQQ LATSSNHEIN
401: EDNNNNEGGR SDGGDHHNTQ RHHHQQQQQQ HHHHNILSGL NQYGRQVSGE SQASDSLGGG EEDPQD
Best Arabidopsis Sequence Match ( AT3G47620.1 )
(BLAST)
001: MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD DNHQQQPSPS SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
Arabidopsis Description
TCP14Transcription factor TCP14 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z00]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.