Factsheet for Bra025312.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86460	Canola	plastid	100.0	100.0
AT3G27925.1	Thale cress	plastid	83.56	83.37
HORVU1Hr1G089820.2	Barley	plastid	70.09	80.58
VIT_18s0072g00970.t01	Wine grape	plastid	76.26	78.04
KRG93298	Soybean	nucleus, plastid	75.57	76.8
KRH56605	Soybean	plastid	73.74	75.82
TraesCS1B01G437600.1	Wheat	plastid	72.37	74.41
OQU78439	Sorghum	plastid	73.52	74.36
TraesCS1D01G416000.1	Wheat	plastid	72.6	74.13
TraesCS1A01G408900.1	Wheat	plastid	61.64	73.57
Os05t0568900-01	Rice	plastid	73.29	73.46
PGSC0003DMT400001298	Potato	plastid	71.92	73.26
Solyc02g086830.2.1	Tomato	plastid	71.46	72.79
GSMUA_Achr1P13970_001	Banana	plastid	71.92	70.79
Zm00001d009613_P001	Maize	plastid	72.83	69.2
Zm00001d039059_P001	Maize	plastid	72.15	65.7
HORVU3Hr1G101230.2	Barley	plastid	41.32	60.54
Zm00001d020604_P001	Maize	plastid	27.85	48.41
Bra013300.1-P	Field mustard	plastid	28.08	38.92
Bra040850.1-P	Field mustard	plastid	39.27	38.14

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.10	EnsemblPlantsGene:Bra025312	EnsemblPlants:Bra025312.1	EnsemblPlants:Bra025312.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008236	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0010206
GO:GO:0015979	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	GO:GO:0042802
InterPro:IPR001478	UniProt:M4E956	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180	PFAM:PF13365
PRINTS:PR00834	PFscan:PS50106	PANTHER:PTHR43019	PANTHER:PTHR43019:SF4	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA
SMART:SM00228	SUPFAM:SSF50156	SUPFAM:SSF50494	UniParc:UPI000253FC2C	SEG:seg	:

Description

AT3G27925 (E=3e-196) DEGP1, Deg1 | DEGP1 (DegP protease 1); serine-type endopeptidase/ serine-type peptidase

Coordinates

chrA06:+:22245025..22247650

Molecular Weight (calculated)

46330.4 Da

IEP (calculated)

6.374

GRAVY (calculated)

0.040

Length

438 amino acids

Sequence
(BLAST)

001: MATTSSLLLS TLFLHSPPPP SSSRFSNGSF FNPSPRSLSL YPVRSKRCLR ILSKLPLDDT DNDDSPLLPR LSAAAVKPFL LLCTSVALSF SLFAASPAVE
101: SAAAFVVTTP RKLQTDELAT VRLFQENTPS VVYITNLAVR QDAFTLDVLE VPQGSGSGFV WDKQGHIVTN YHVIRGASDL RVTLADQSTY DAKVVGFDQD
201: KDVAVLRIDA PKDKLRPIPV GVSADLLVGQ KVFAIGNPFG LDHTLTTGVI SGLRREISSA ATGRPIQDVI QTDAAINPGN SGGPLLDSSG TLIGINTAIY
301: SPSGASSGVG FSIPVDTVGG IVDQLVRFGK VTRPILGIKF APDQSVEQLG VSGVLVLDAP PTGPAGKAGL QSTKRDGYGR LILGDIITSV NGTKVTNGSD
401: LYRILDQCKV GDEVTVEVLR GDHKEKISVT LEPKPDET

Best Arabidopsis Sequence Match ( AT3G27925.1 )
(BLAST)

001: MATTTSCSLL LSSTLFLHSP PSSHLSFFNL SSSRSSPISL YPIRSKRYFR ILSKLSLNDN NRDDDDDTLH FTPFSAVKPF FLLCTSVALS FSLFAASPAV
101: ESASAFVVST PKKLQTDELA TVRLFQENTP SVVYITNLAV RQDAFTLDVL EVPQGSGSGF VWDKQGHIVT NYHVIRGASD LRVTLADQTT FDAKVVGFDQ
201: DKDVAVLRID APKNKLRPIP VGVSADLLVG QKVFAIGNPF GLDHTLTTGV ISGLRREISS AATGRPIQDV IQTDAAINPG NSGGPLLDSS GTLIGINTAI
301: YSPSGASSGV GFSIPVDTVG GIVDQLVRFG KVTRPILGIK FAPDQSVEQL GVSGVLVLDA PPSGPAGKAG LQSTKRDGYG RLVLGDIITS VNGTKVSNGS
401: DLYRILDQCK VGDEVTVEVL RGDHKEKISV TLEPKPDES

Arabidopsis Description

DEGP1DEGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V823]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.