Factsheet for Os05t0568900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

nucleus: 19321431
plastid: 21433289

msms PMID: 19321431 doi

MK Choudhary, D Basu, A Datta, N Chakraborty, S Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G089820.2	Barley	plastid	78.26	89.76
OQU78439	Sorghum	plastid	82.15	82.91
TraesCS1B01G437600.1	Wheat	plastid	78.72	80.75
TraesCS1D01G416000.1	Wheat	plastid	79.18	80.65
TraesCS1A01G408900.1	Wheat	plastid	65.22	77.66
Zm00001d009613_P001	Maize	plastid	78.03	73.97
KRG93298	Soybean	nucleus, plastid	72.77	73.78
KRH56605	Soybean	plastid	71.85	73.71
CDX86460	Canola	plastid	73.46	73.29
Bra025312.1-P	Field mustard	plastid	73.46	73.29
GSMUA_Achr1P13970_001	Banana	plastid	74.14	72.81
PGSC0003DMT400001298	Potato	plastid	71.4	72.56
CDY58511	Canola	plastid	72.08	72.41
AT3G27925.1	Thale cress	plastid	72.31	71.98
Solyc02g086830.2.1	Tomato	plastid	70.71	71.86
VIT_18s0072g00970.t01	Wine grape	plastid	69.79	71.26
Zm00001d039059_P001	Maize	plastid	76.2	69.23
HORVU3Hr1G101230.2	Barley	plastid	44.62	65.22
Zm00001d020604_P001	Maize	plastid	26.32	45.63
Os04t0459900-01	Rice	plastid	37.53	36.85
Os12t0616600-01	Rice	plastid, vacuole	9.61	26.92
Os11t0246600-00	Rice	mitochondrion	23.11	22.85

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.30.42.10	Gene3D:2.40.10.10	EntrezGene:4339651	ProteinID:AAT93929.1	ProteinID:AAU10675.1
EMBL:AK061450	EMBL:AK120626	ProteinID:BAF18274.1	ProteinID:BAS95402.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008236	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0010206	GO:GO:0015979
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977	GO:GO:0042802	InterPro:IPR001478
EnsemblPlantsGene:Os05g0568900	EnsemblPlants:Os05t0568900-01	InterPro:PDZ	InterPro:PDZ_sf	PFAM:PF13180	PFAM:PF13365
PRINTS:PR00834	PFscan:PS50106	PANTHER:PTHR43343	PANTHER:PTHR43343:SF3	InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA
UniProt:Q6AUN5	MEROPS:S01.472	SMART:SM00228	SUPFAM:SSF50156	SUPFAM:SSF50494	UniParc:UPI0000403639
RefSeq:XP_015640295.1	RefSeq:XP_015640296.1	SEG:seg	:	:	:

Description

Deg protease 9, DEG PROTEASE 9Similar to Protease Do-like 1, chloroplast precursor (EC 3.4.21.-). (Os05t0568900-01)

Coordinates

chr5:-:28315242..28318639

Molecular Weight (calculated)

45532.4 Da

IEP (calculated)

8.087

GRAVY (calculated)

0.032

Length

437 amino acids

Sequence
(BLAST)

001: MAAASSSAAA CFLSPSPPPR PRHHSIKHLA CAASRSPSPG PSSSRSLALP SPSASASPWP WPRRLRDLLP DETGRILSSA TGSLIVALAS AALILGDAGS
101: ASAFVVATPR KLQADELATV RLFQENTPSV VYITNLAVRQ DAFTLDVLEV PQGSGSGFVW DKSGHIVTNF HVIRGASDLR VTLADQTVYE AQVVGFDQDK
201: DVAVLRIKAP TDKLRPVPVG VSADLLVGQK VFAIGNPFGL DHTLTTGVIS GLRREISSAA TGRPIQDVIQ TDAAINPGNS GGPLLDSSGN LIGVNTAIYS
301: PSGASSGVGF SIPVDTVGGI VDQLIKFGKV TRPILGIKFA PDQSVEQLGL SGVLVLDAPP NGPAGKAGLQ STKRDSYGRL ILGDIITSVN GTKVTNGSDL
401: YRILDQCKVG EKVTVEVLRG DQKEKIPVIL EPKPDES

Best Arabidopsis Sequence Match ( AT3G27925.1 )
(BLAST)

001: MATTTSCSLL LSSTLFLHSP PSSHLSFFNL SSSRSSPISL YPIRSKRYFR ILSKLSLNDN NRDDDDDTLH FTPFSAVKPF FLLCTSVALS FSLFAASPAV
101: ESASAFVVST PKKLQTDELA TVRLFQENTP SVVYITNLAV RQDAFTLDVL EVPQGSGSGF VWDKQGHIVT NYHVIRGASD LRVTLADQTT FDAKVVGFDQ
201: DKDVAVLRID APKNKLRPIP VGVSADLLVG QKVFAIGNPF GLDHTLTTGV ISGLRREISS AATGRPIQDV IQTDAAINPG NSGGPLLDSS GTLIGINTAI
301: YSPSGASSGV GFSIPVDTVG GIVDQLVRFG KVTRPILGIK FAPDQSVEQL GVSGVLVLDA PPSGPAGKAG LQSTKRDGYG RLVLGDIITS VNGTKVSNGS
401: DLYRILDQCK VGDEVTVEVL RGDHKEKISV TLEPKPDES

Arabidopsis Description

DEGP1DEGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V823]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.