Factsheet for HORVU3Hr1G101230.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G408900.1	Wheat	plastid	73.58	59.95
HORVU1Hr1G089820.2	Barley	plastid	67.56	53.02
OQU78439	Sorghum	plastid	71.57	49.42
Zm00001d009613_P001	Maize	plastid	74.25	48.16
Os05t0568900-01	Rice	plastid	65.22	44.62
Zm00001d020604_P001	Maize	plastid	37.46	44.44
Zm00001d039059_P001	Maize	plastid	67.89	42.2
Bra025312.1-P	Field mustard	plastid	60.54	41.32
CDX86460	Canola	plastid	60.54	41.32
CDY58511	Canola	plastid	58.86	40.46
VIT_18s0072g00970.t01	Wine grape	plastid	57.53	40.19
KRH56605	Soybean	plastid	56.52	39.67
GSMUA_Achr1P13970_001	Banana	plastid	58.86	39.55
Solyc02g086830.2.1	Tomato	plastid	56.86	39.53
KRG93298	Soybean	nucleus, plastid	56.86	39.44
AT3G27925.1	Thale cress	plastid	56.86	38.72
PGSC0003DMT400001298	Potato	plastid	55.18	38.37
HORVU2Hr1G080310.2	Barley	extracellular	33.44	31.55
HORVU5Hr1G008160.5	Barley	mitochondrion	34.45	30.65
HORVU4Hr1G014960.11	Barley	plastid	20.74	15.9

Protein Annotations

EnsemblPlants:HORVU3Hr1G101230.2	EnsemblPlantsGene:HORVU3Hr1G101230	Gene3D:2.40.10.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:Peptidase_S1C
InterPro:Peptidase_S1_PA	PANTHER:PTHR43343	PFAM:PF13365	PRINTS:PR00834	SEG:seg	SUPFAM:SSF50494
UniParc:UPI000B47A1C5	UniProt:A0A287MI39	MapMan:19.4.2.3	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:663958565..663961752

Molecular Weight (calculated)

31190.5 Da

IEP (calculated)

9.423

GRAVY (calculated)

0.170

Length

299 amino acids

Sequence
(BLAST)

001: AALLSPGAVS FLVAPFPLAR PPRPRPCHSL RHLARAAAAK PLAAPLAPPA SSSPRRPLRD LALRDLAAGP VAEAAWRALA AAAGPLVVAL ASAMLILKDA
101: GSASAYVVAT PRKLHADELP TVRLFKDNTP SVVYITNGPT SQDAFTLDVL EVPQGSGSGF VWDKLGHIVT NFHVIHGASD LRVTLADQSV YEAQVVGFDQ
201: DKDVAVLSIE APKDKLRPLP VGVSANLLVG QKVYASLFGL DHTLTTGVIS GLRREISSNA TGRPIQDVIQ TDAAINPGNS GGPLLDSSGN LIRVNTAIY

Best Arabidopsis Sequence Match ( AT3G27925.1 )
(BLAST)

001: MATTTSCSLL LSSTLFLHSP PSSHLSFFNL SSSRSSPISL YPIRSKRYFR ILSKLSLNDN NRDDDDDTLH FTPFSAVKPF FLLCTSVALS FSLFAASPAV
101: ESASAFVVST PKKLQTDELA TVRLFQENTP SVVYITNLAV RQDAFTLDVL EVPQGSGSGF VWDKQGHIVT NYHVIRGASD LRVTLADQTT FDAKVVGFDQ
201: DKDVAVLRID APKNKLRPIP VGVSADLLVG QKVFAIGNPF GLDHTLTTGV ISGLRREISS AATGRPIQDV IQTDAAINPG NSGGPLLDSS GTLIGINTAI
301: YSPSGASSGV GFSIPVDTVG GIVDQLVRFG KVTRPILGIK FAPDQSVEQL GVSGVLVLDA PPSGPAGKAG LQSTKRDGYG RLVLGDIITS VNGTKVSNGS
401: DLYRILDQCK VGDEVTVEVL RGDHKEKISV TLEPKPDES

Arabidopsis Description

DEGP1DEGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V823]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.