Factsheet for HORVU5Hr1G008160.5

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	extracellular, mitochondrion
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G030700.1	Wheat	mitochondrion, plastid, vacuole	82.74	90.55
TraesCS5D01G039300.1	Wheat	mitochondrion	82.74	89.39
TraesCS5A01G031100.1	Wheat	mitochondrion	77.38	84.42
EES16390	Sorghum	plastid	69.94	76.3
VIT_00s1450g00010.t01	Wine grape	cytosol, peroxisome	36.31	76.25
Zm00001d000230_P002	Maize	plastid	65.48	71.2
VIT_10s0003g03850.t01	Wine grape	cytosol, peroxisome, plastid	48.81	70.39
KRH21081	Soybean	plastid	54.17	59.87
KRH11171	Soybean	plastid	48.81	58.36
PGSC0003DMT400076806	Potato	plastid	49.4	54.97
Solyc08g048550.2.1	Tomato	plastid	47.62	52.29
CDX99473	Canola	plastid	48.51	51.91
CDX78844	Canola	plastid	48.51	51.58
Bra013300.1-P	Field mustard	plastid	48.51	51.58
AT4G18370.1	Thale cress	plastid	48.21	50.15
Os12t0616600-01	Rice	plastid, vacuole	23.21	50.0
HORVU2Hr1G080310.2	Barley	extracellular	37.5	39.75
HORVU3Hr1G101230.2	Barley	plastid	30.65	34.45
HORVU1Hr1G089820.2	Barley	plastid	37.2	32.81
VIT_00s1463g00010.t01	Wine grape	plastid	10.71	27.27
HORVU4Hr1G014960.11	Barley	plastid	25.0	21.54

Protein Annotations

MapMan:19.4.2.3	Gene3D:2.40.10.10	UniProt:A0A287QA17	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009543	GO:GO:0009579
GO:GO:0009987	GO:GO:0010206	GO:GO:0015979	GO:GO:0016787	GO:GO:0019538	GO:GO:0031977
EnsemblPlantsGene:HORVU5Hr1G008160	EnsemblPlants:HORVU5Hr1G008160.5	PFAM:PF13365	PRINTS:PR00834	PANTHER:PTHR43019	PANTHER:PTHR43019:SF3
InterPro:Peptidase_S1C	InterPro:Peptidase_S1_PA	SUPFAM:SSF50494	UniParc:UPI000B471620	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:18791567..18799096

Molecular Weight (calculated)

35527.3 Da

IEP (calculated)

6.407

GRAVY (calculated)

-0.196

Length

336 amino acids

Sequence
(BLAST)

001: LEANERLSPR RDMALHPLLR LLLRPPPPPP TRRTPDLPAP SPTRRGAAAA LLLLAVAAPP PRPARAQPDG EDDVDEPHVV RLFEEATPSV VFIKDLLVAP
101: PPRGRDGGGA QPVEDEEGGA TVEGTGSGFV WDSLGHIVTN YHVVAKLAGD GSESHRCKVF LEDSSGTSYS KEGRLIGYDP TYDLAVLKVD VDGDKLRPAL
201: LGTSQGLRVG QSCFAIGNPL GYEHTLTTGV VSGLGREIPS PNGRVIRGAI QTDAAINAGN SGGPLIDSYG HVIGVNTATF TRKGSGISSG VNFAIPIDTV
301: VRSVPNLIVY GTDIRSLKQI VPTPSRENIG ERIYMV

Best Arabidopsis Sequence Match ( AT4G18370.1 )
(BLAST)

001: MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP
101: SVVYIEAIEL PKTSSGDILT DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI VGLDPDNDLA VLKIETEGRE
201: LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI
301: PIDTVVRTVP YLIVYGTAYR DRF

Arabidopsis Description

DEGP5Protease Do-like 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SEL7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.